Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU307039 |
| length | 998 |
| lncRNA type | sense_over |
| GC content | 0.45 |
| exon number | 2 |
| gene id | ascl1a |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053134.1 |
| NCBI id | CM020931.1 |
| chromosome length | 29109922 |
| location | 7423618 ~ 7426254 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU307033 | lncRNA | upstream | 56889 | 7367376 ~ 7368168 (+) | False | klhl42 |
| TU307019 | lncRNA | upstream | 78895 | 7335054 ~ 7346162 (+) | True | G226352 |
| TU306969 | lncRNA | upstream | 152741 | 7272077 ~ 7272316 (+) | True | G226319 |
| TU306968 | lncRNA | upstream | 153350 | 7271317 ~ 7271707 (+) | True | G226318 |
| TU306967 | lncRNA | upstream | 154304 | 7269104 ~ 7270753 (+) | True | G226317 |
| TU307093 | lncRNA | downstream | 104272 | 7530442 ~ 7532020 (+) | False | LOC120553154 |
| TU307120 | lncRNA | downstream | 140560 | 7566730 ~ 7569202 (+) | False | LOC120553156 |
| TU307137 | lncRNA | downstream | 190018 | 7616188 ~ 7707570 (+) | False | G226452 |
| TU307138 | lncRNA | downstream | 190018 | 7616188 ~ 7621731 (+) | True | G226452 |
| XR_005638193.1 | lncRNA | downstream | 465239 | 7891409 ~ 7955485 (+) | True | LOC120553625 |
| XM_039792100.1 | mRNA | upstream | 24658 | 7370442 ~ 7400399 (+) | True | nrip2 |
| XM_039792444.1 | mRNA | upstream | 56841 | 7363325 ~ 7368216 (+) | True | klhl42 |
| XM_039791041.1 | mRNA | upstream | 95036 | 7323070 ~ 7330021 (+) | False | amdhd1 |
| XM_039791101.1 | mRNA | upstream | 103868 | 7318517 ~ 7321189 (+) | True | snrpf |
| XM_039791597.1 | mRNA | upstream | 157607 | 7257270 ~ 7267450 (+) | True | metap2a |
| XM_039791251.1 | mRNA | downstream | 83794 | 7509964 ~ 7524419 (+) | True | pah |
| XM_039791253.1 | mRNA | downstream | 99722 | 7525892 ~ 7532077 (+) | True | LOC120553154 |
| XM_039791254.1 | mRNA | downstream | 120258 | 7546428 ~ 7562205 (+) | True | LOC120553155 |
| XM_039791255.1 | mRNA | downstream | 140485 | 7566655 ~ 7569303 (+) | True | LOC120553156 |
| XM_039792172.1 | mRNA | downstream | 166709 | 7592879 ~ 7605838 (+) | False | LOC120553589 |
| TU307011 | other | upstream | 24658 | 7396494 ~ 7400399 (+) | False | nrip2 |
| XR_005638075.1 | other | upstream | 92798 | 7323070 ~ 7332259 (+) | True | amdhd1 |
| TU307013 | other | upstream | 104008 | 7318540 ~ 7321049 (+) | False | snrpf |
| unassigned_transcript_1480 | other | upstream | 277717 | 7147269 ~ 7147340 (+) | True | trnaw-cca_35 |
| XR_005638176.1 | other | upstream | 2051854 | 5283759 ~ 5373203 (+) | False | abcc9 |
| TU307294 | other | downstream | 1000521 | 8426691 ~ 8432697 (+) | True | rps16 |
| XR_005638164.1 | other | downstream | 1708424 | 9134594 ~ 9173220 (+) | True | lhfpl3 |
| TU307644 | other | downstream | 1811094 | 9237264 ~ 9241349 (+) | False | ndufb2 |
| unassigned_transcript_1481 | other | downstream | 2766156 | 10192326 ~ 10192412 (+) | True | trnay-gua_57 |
| unassigned_transcript_1482 | other | downstream | 2768260 | 10194430 ~ 10194516 (+) | True | trnay-gua_58 |
