RNA id: XM_039792211.1


Basic Information

Item Value
RNA id XM_039792211.1
length 541
RNA type mRNA
GC content 0.48
exon number 4
gene id ndufb2
representative True

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 9237226 ~ 9241349 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CCTTCTGTCCAATCACAGCTGTCGTTGTTGGAAGGCCGTTTATTGACAAGGGGAGAAGGTGACTCCTCTACCCAGCAGGGCAATACTTCGTACAAATCTTAACAAATAACCATAAATAAGACAGCAACTATGTCTTCTTTTGGAAGGGCGTTGGGAGTCCTTCGGACAGGAACTCGGCTCCTCAGACGCGGTACACAAAGGATAACGACCAGAAAGGCCAGCGGAGGGCCGCACATTGAGCCACAGTACAGGCAATATCCCCAGATAACGAAGAAACAGAAATTCGAATCCGAGCTCATCAGCGGTGTCATGTGGTTCTGGATCCTTTGGCACTGCTGGCACGACCCTGATGCAGTCCTGGGTCACTTCCCCTGGCCGGATGCTTCTGCATGGACAGATGAGGACCTTGGAATCCCAGCAGATGACGAGGAATAAgatcaccATGAGGGTTCAAGCTGCTGGACAAGTCTTTGTGGAAATCTTCAGGATATTCTGAAAGTCAGTGTTGTACATAGACTAATAAAATTCTTTAAATATTCTA

Function

GO: NA

KEGG:

id description
K03958 NDUFB2; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU307627 lncRNA upstream 32775 9179139 ~ 9204451 (+) True G226810
TU307553 lncRNA upstream 197400 9037773 ~ 9039826 (+) True G226755
TU307545 lncRNA upstream 220951 9016073 ~ 9016275 (+) True G226748
TU307544 lncRNA upstream 221325 9015615 ~ 9015901 (+) True G226747
TU307511 lncRNA upstream 223580 9012843 ~ 9013646 (+) True G226717
TU307747 lncRNA downstream 409901 9651247 ~ 9654254 (+) True G226885
TU307781 lncRNA downstream 510598 9751944 ~ 9754116 (+) True G226918
TU307786 lncRNA downstream 555127 9796473 ~ 9826525 (+) True G226921
TU307787 lncRNA downstream 564896 9806242 ~ 9806602 (+) True G226922
TU307795 lncRNA downstream 626229 9867575 ~ 9868085 (+) True G226930
XM_039791817.1 mRNA upstream 66846 9134594 ~ 9170380 (+) False lhfpl3
XM_039791818.1 mRNA upstream 117241 9116805 ~ 9119985 (+) True guca1a
XM_039791611.1 mRNA upstream 147678 9087173 ~ 9089548 (+) True llph
XM_039792055.1 mRNA upstream 217097 9017086 ~ 9020129 (+) True fgf23
XM_039792293.1 mRNA upstream 227039 9006558 ~ 9010187 (+) True LOC120553653
XM_039791669.1 mRNA downstream 26852 9268198 ~ 9273908 (+) True LOC120553346
XM_039791670.1 mRNA downstream 26852 9268198 ~ 9273908 (+) False LOC120553346
XM_039791672.1 mRNA downstream 27723 9269069 ~ 9273908 (+) False LOC120553346
XM_039791883.1 mRNA downstream 432645 9673991 ~ 9679815 (+) True cd36
XM_039791601.1 mRNA downstream 711254 9952600 ~ 10029904 (+) False chrm2a
XR_005638164.1 other upstream 64006 9134594 ~ 9173220 (+) True lhfpl3
TU307294 other upstream 804529 8426691 ~ 8432697 (+) True rps16
TU307011 other upstream 1836827 7396494 ~ 7400399 (+) False nrip2
XR_005638075.1 other upstream 1904967 7323070 ~ 7332259 (+) True amdhd1
TU307013 other upstream 1916177 7318540 ~ 7321049 (+) False snrpf
unassigned_transcript_1481 other downstream 950980 10192326 ~ 10192412 (+) True trnay-gua_57
unassigned_transcript_1482 other downstream 953084 10194430 ~ 10194516 (+) True trnay-gua_58
unassigned_transcript_1483 other downstream 953774 10195120 ~ 10195206 (+) True trnay-gua_59
TU308063 other downstream 1455908 10697254 ~ 10699718 (+) True G227121
TU308097 other downstream 1490723 10732069 ~ 10737503 (+) True G227141

Expression Profile