Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU308163 |
| length | 1352 |
| lncRNA type | intronic |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G227184 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053134.1 |
| NCBI id | CM020931.1 |
| chromosome length | 29109922 |
| location | 10956484 ~ 10976314 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU308143 | lncRNA | upstream | 20739 | 10935104 ~ 10935745 (+) | True | G227177 |
| XR_005638173.1 | lncRNA | upstream | 28630 | 10914935 ~ 10927854 (+) | True | LOC120553495 |
| TU308118 | lncRNA | upstream | 83805 | 10872047 ~ 10872679 (+) | True | G227155 |
| TU308115 | lncRNA | upstream | 83805 | 10872100 ~ 10872679 (+) | False | G227155 |
| TU308112 | lncRNA | upstream | 104533 | 10842556 ~ 10851951 (+) | False | G227152 |
| XR_005638081.1 | lncRNA | downstream | 4087 | 10967639 ~ 10968248 (+) | True | LOC120553015 |
| TU308188 | lncRNA | downstream | 47562 | 11011114 ~ 11011315 (+) | True | G227204 |
| TU308212 | lncRNA | downstream | 79860 | 11043412 ~ 11054195 (+) | True | G227217 |
| XR_005638092.1 | lncRNA | downstream | 128638 | 11092190 ~ 11092674 (+) | True | LOC120553063 |
| TU308210 | lncRNA | downstream | 139284 | 11102836 ~ 11112905 (+) | True | G227216 |
| XM_039791229.1 | mRNA | upstream | 282433 | 10672048 ~ 10674051 (+) | True | si:dkeyp-38g8.5 |
| XM_039791219.1 | mRNA | upstream | 297473 | 10648321 ~ 10659011 (+) | True | scyl2 |
| XM_039791220.1 | mRNA | upstream | 297473 | 10648321 ~ 10659011 (+) | False | scyl2 |
| XM_039791221.1 | mRNA | upstream | 312713 | 10638588 ~ 10643771 (+) | True | depdc4 |
| XM_039792002.1 | mRNA | upstream | 434247 | 10379970 ~ 10522237 (+) | False | anks1b |
| XM_039791047.1 | mRNA | downstream | 55674 | 11019226 ~ 11023758 (+) | True | LOC120553009 |
| XM_039791244.1 | mRNA | downstream | 399211 | 11362763 ~ 11367955 (+) | True | lrrc4.1 |
| XM_039791007.1 | mRNA | downstream | 489908 | 11453460 ~ 11456592 (+) | True | pax4 |
| XM_039792456.1 | mRNA | downstream | 848475 | 11812027 ~ 11822653 (+) | True | LOC120553760 |
| XM_039792457.1 | mRNA | downstream | 851561 | 11815113 ~ 11822653 (+) | True | LOC120553761 |
| TU308097 | other | upstream | 218981 | 10732069 ~ 10737503 (+) | True | G227141 |
| TU308063 | other | upstream | 256766 | 10697254 ~ 10699718 (+) | True | G227121 |
| unassigned_transcript_1483 | other | upstream | 761278 | 10195120 ~ 10195206 (+) | True | trnay-gua_59 |
| unassigned_transcript_1482 | other | upstream | 761968 | 10194430 ~ 10194516 (+) | True | trnay-gua_58 |
| unassigned_transcript_1481 | other | upstream | 764072 | 10192326 ~ 10192412 (+) | True | trnay-gua_57 |
| TU308205 | other | downstream | 139284 | 11102836 ~ 11112905 (+) | False | G227216 |
| TU308207 | other | downstream | 139284 | 11102836 ~ 11112905 (+) | False | G227216 |
| TU308276 | other | downstream | 725617 | 11689169 ~ 11757317 (+) | True | G227278 |
| TU308397 | other | downstream | 1157320 | 12120872 ~ 12126545 (+) | False | st8sia1 |
| XR_005638103.1 | other | downstream | 2041787 | 13005339 ~ 13020260 (+) | False | nrf1 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000001_09932205_09934551.mRNA | True | 2538 | mRNA | 0.36 | 3 | CI01000001 | 9931155 ~ 9935172 (+) |
