Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU308577 |
| length | 342 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G227488 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053134.1 |
| NCBI id | CM020931.1 |
| chromosome length | 29109922 |
| location | 12639434 ~ 12639775 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU308476 | lncRNA | downstream | 669956 | 11966652 ~ 11969478 (-) | True | G227407 |
| XR_005638139.1 | lncRNA | downstream | 690233 | 11944330 ~ 11949201 (-) | True | LOC120553250 |
| TU308452 | lncRNA | downstream | 732614 | 11895646 ~ 11906820 (-) | False | LOC120553249 |
| TU308456 | lncRNA | downstream | 732614 | 11895646 ~ 11906820 (-) | False | LOC120553249 |
| TU308458 | lncRNA | downstream | 732614 | 11906248 ~ 11906820 (-) | False | LOC120553249 |
| XR_005638105.1 | lncRNA | upstream | 260539 | 12900314 ~ 13004455 (-) | True | LOC120553123 |
| XR_005638106.1 | lncRNA | upstream | 262423 | 12902198 ~ 13004455 (-) | False | LOC120553123 |
| XR_005638104.1 | lncRNA | upstream | 262423 | 12902198 ~ 13004455 (-) | False | LOC120553123 |
| TU308709 | lncRNA | upstream | 336611 | 12976386 ~ 13004473 (-) | False | LOC120553123 |
| TU308719 | lncRNA | upstream | 398418 | 13038193 ~ 13059329 (-) | False | ube2h |
| XM_039791392.1 | mRNA | downstream | 84771 | 12498709 ~ 12554663 (-) | False | exoc4 |
| XM_039791391.1 | mRNA | downstream | 84805 | 12433896 ~ 12554629 (-) | True | exoc4 |
| XM_039791395.1 | mRNA | downstream | 206297 | 12415814 ~ 12433137 (-) | False | lrguk |
| XM_039791393.1 | mRNA | downstream | 206297 | 12415814 ~ 12433137 (-) | True | lrguk |
| XM_039791396.1 | mRNA | downstream | 206297 | 12415815 ~ 12433137 (-) | False | lrguk |
| XM_039791617.1 | mRNA | upstream | 398376 | 13038151 ~ 13066528 (-) | True | ube2h |
| XM_039792336.1 | mRNA | upstream | 427638 | 13067413 ~ 13075321 (-) | True | zc3hc1 |
| XM_039791483.1 | mRNA | upstream | 443465 | 13083240 ~ 13094167 (-) | True | cax1 |
| XM_039791486.1 | mRNA | upstream | 443465 | 13083240 ~ 13094165 (-) | False | cax1 |
| XM_039791485.1 | mRNA | upstream | 443465 | 13083240 ~ 13094165 (-) | False | cax1 |
| TU308500 | other | downstream | 351280 | 12284926 ~ 12288154 (-) | True | G227429 |
| XR_005638137.1 | other | downstream | 790493 | 11838944 ~ 11848941 (-) | False | cracr2ab |
| XR_005638189.1 | other | downstream | 962602 | 11624009 ~ 11676832 (-) | False | pcloa |
| TU308180 | other | downstream | 1658175 | 10980198 ~ 10981259 (-) | True | G227197 |
| TU308019 | other | downstream | 2116472 | 10513494 ~ 10522962 (-) | True | G227082 |
| TU308872 | other | upstream | 880490 | 13520265 ~ 13529778 (-) | False | LOC120553470 |
| TU308919 | other | upstream | 1011887 | 13651662 ~ 13659272 (-) | True | LOC120553486 |
| unassigned_transcript_1491 | other | upstream | 1169832 | 13809607 ~ 13809679 (-) | True | trnak-cuu_13 |
| TU309376 | other | upstream | 2420228 | 15060003 ~ 15061429 (-) | False | znf800b |
| TU309380 | other | upstream | 2422488 | 15062263 ~ 15088329 (-) | False | znf800b |
