RNA id: XM_039791691.1


Basic Information

Item Value
RNA id XM_039791691.1
length 2447
RNA type mRNA
GC content 0.51
exon number 12
gene id waslb
representative True

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 14424237 ~ 14450589 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CTCTGGGCTCTCTGGCGGACGGACTTCCCAGGAAACTTTTTTACCGTTTTCCTTCTTTGCTCAGTCGCTGCAATTTTGACCTTATTGTAAAGAGGAGCGGGACGTCGCAGTGCATCCCTAAACGGCATACATTTTTTGGCAACCCAGTCTTGCGGACCTCCTGGATAAATCAAACCGGTGTAAGGGGGTCGAAGGAAGGCCACGGATGACCGAGGGATTGTTTATGTATCTTTTTGGATCTCATATAACGAGTTACAGTCGTTGCAGACTTTATAAATTGATCACTAATAATGAGTGGACATCCGTCACAACGGCGGCTAACAAATGTCGGTTCGATACTACTGACCCCGCAGGAAAATGAATCCCTTTTCAATTACCTTGGCAGGAAATGCAtgtcaTTGTCTTCAGCAGTGGTCCAGGTGTTCACAGCCGAAAGGAACTCCAGCTGGACTAAGAGATGTTGCGGAGTGGCCTGTCTGGTCAAAGACAACCCCCTACGATCCTACTTCATCAGGGTCGTGGACATCAAGGATGGTAAGATGATGTTTGAACAGGAGCTGTACAACAACTTCAGCATCTACCTCCCCAAACCTTACTTCATCACATTTGCTGGAGATACATGCCAAGTGGGTCTGAACTTTGCCAGTGAAGAGGAGACCAAGCGTTTTCGTAGCCACGTGACAGATCTAATTGGGAGAAGACAGAGGAAATCTGAGAAAAGACGCGACCCTCCAAATGGCCCGACGTTGCCCATGGCTACCGTCGACATCAAAAACCCAGAGATCAGCAATGTTCAGCGTTACCATAACAACTCTCAGGTGAACAACATTGTGCACTCGTCCTTCcagaagagggagaaaaagggCAAGGCAAAGAAGAAGAGGTTGACCAAGGCAGACATCGGCACACCGAGCAACTTCCAGCACATCGGGCATGTAGGATGGGATCCGAATACAGGTTTTGATCTAAATAACTTGGACCCAGAGCTGAAGAATCTGTTCGATATGTGCGGCATCTCCGAGGCTCAGCTGAAGGACAAGGAGACCTCGAAGGTTATCTACGACTTCATTGAGAAGAAAGGAGGCGTAGAGGCTGTCAAAAATGAGCTACGGAGACAAGctccccccccccctccatccaGAGGCGGccctcctcccccacccccGCACCACAGCTcagcccctcctcccccccctcctcctgccAGGGGGCGAGGTGCGCCGCCACCACCTCCCCCCTCCAGAGCACCCATCTCtgcgccccctcctccccctccgtCTCGCCCGGGCATGTCCGCCCCACCGCCTCCGCCCAACCGAGGCACTCTCCCGCCCTCCCCGCCACCGGCCCATGCCTCGATTCACGCGGCGCCTCCCCCGCCACCTCCACCCTCATCCTCCACTCCGTACAGTACCGGCGCGccgcctcctccccctcctcctcccccaccccctggcCCTCCGCCCCCCGCCCCTCCGCTGCCCACCGAGGCTAATGGCGGCGACAGCGGCCTGCCCTCGACCGGCAAGCCGGCGCTGCTGAGTCAGATCAGAGAAGGCACCCAGCTGAAGAAGGTGGAACAGAAAGAGAGGCCGGTGTCCAACAACACCGGCAGAGACGCACTTCTGGACCAAATCCGACAAGGAATCCAGCTCAAAGCGAGGGAAGACAACGCCGACTCAACCCCTTCCACCCCGGCTCCCTCGGCAGGCATCGTCGGGGCCCTGATGGAGGTGATGCAGAAACGGAGCAAGGCTATCCACTCTTCAGATGAGGACGATGACGATGAAGATGAGGAGGACTTtgaggatgatgatgaatgGGAGGACTAGCgacattttgtgtctttttttttttttttttttttttttttctcttttcctctccaaCACGTGGATGATTATGACACTAAAATAGTTTTTGTCTTTCTAAAAAGAAATCTTTCATTTCAAAATtctaaatgtaaatgttctatCAATTTGCTGTATATTTTTGTTGccttcatgcttttttttttattattaatctgTGCAATACCTCATTTAATCTGTATGTTTGTCATTCTCATTATCTTAGGTTGTTGTATCTTCATCTCTCAATCGTGTCTGTCTCTACTCCGTTGGCTCCATCTCTGATATGTCACATATCTCATTTTAACCGTGTTCTGCTCTTTCCATCGTTCTgcatctctttctcctcctcccacGTCAACAACTCTTTGATGTTCATCACCTCCATCTGTCACTCGGCCATCCTTCATATCTAGTGCCTCCCAtcacacatgttctctccctgTCACTGTCACGCTCCCAGTCCCGAGATTAACGTGCAATTTTACATCAAGTTGTCTCttagatttgaatgttttttcttttggtcATTGTTTGAAAGGTGGGCTTAGTCGCCGCAAGTCCTCCATCAGTTGTGTCTTCATTGTTTCGTCAGGA

Function

GO: NA

KEGG:

id description
K23612 WASL; neural Wiskott-Aldrich syndrome protein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU309114 lncRNA downstream 194261 14231543 ~ 14231806 (-) True G227814
XR_005638083.1 lncRNA downstream 206469 14178745 ~ 14219598 (-) True LOC120553016
TU309112 lncRNA downstream 245561 14178772 ~ 14180506 (-) False LOC120553016
TU309104 lncRNA downstream 282808 14140179 ~ 14143259 (-) True G227804
TU309070 lncRNA downstream 476186 13949541 ~ 13949881 (-) True G227784
TU309275 lncRNA upstream 183521 14634110 ~ 14635577 (-) False grm8a
TU309356 lncRNA upstream 185066 14635655 ~ 14643449 (-) False grm8a
TU309360 lncRNA upstream 319409 14769998 ~ 14770247 (-) True G228019
TU309361 lncRNA upstream 319909 14770498 ~ 14770967 (-) True G228020
TU309362 lncRNA upstream 323728 14774317 ~ 14774848 (-) True G228021
XM_039791677.1 mRNA downstream 19574 14401227 ~ 14406493 (-) True LOC120553349
XM_039791673.1 mRNA downstream 28288 14392392 ~ 14397779 (-) True LOC120553347
XM_039791614.1 mRNA downstream 34790 14375636 ~ 14391277 (-) False LOC120553322
XM_039791615.1 mRNA downstream 34791 14375636 ~ 14391276 (-) False LOC120553322
XM_039791612.1 mRNA downstream 34791 14375636 ~ 14391276 (-) True LOC120553322
XM_039791825.1 mRNA upstream 15166 14465755 ~ 14468407 (-) True LOC120553439
XM_039791824.1 mRNA upstream 84289 14534878 ~ 14553865 (-) True gpr37b
XM_039791865.1 mRNA upstream 184377 14634966 ~ 15047451 (-) True grm8a
XM_039791870.1 mRNA upstream 184377 14634966 ~ 15039550 (-) False grm8a
XM_039791869.1 mRNA upstream 184377 14634966 ~ 15038320 (-) False grm8a
unassigned_transcript_1491 other downstream 616388 13809607 ~ 13809679 (-) True trnak-cuu_13
TU308919 other downstream 766795 13651662 ~ 13659272 (-) True LOC120553486
TU308872 other downstream 896289 13520265 ~ 13529778 (-) False LOC120553470
TU308500 other downstream 2137913 12284926 ~ 12288154 (-) True G227429
XR_005638137.1 other downstream 2577126 11838944 ~ 11848941 (-) False cracr2ab
TU309376 other upstream 609414 15060003 ~ 15061429 (-) False znf800b
TU309380 other upstream 611674 15062263 ~ 15088329 (-) False znf800b
TU309610 other upstream 1320649 15771238 ~ 15791853 (-) True G228191
TU309744 other upstream 2298253 16748842 ~ 16823432 (-) True G228291
TU309971 other upstream 2844533 17295122 ~ 17302198 (-) True G228465

Expression Profile