RNA id: TU309356



Basic Information


Item Value
RNA id TU309356
length 271
lncRNA type sense_over
GC content 0.48
exon number 2
gene id grm8a
representative False

Chromosome Information


Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 14634110 ~ 15053285 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AAGAAACCGTAATCCAGATGGAGAGGTCCATACCAAATGCTGCTAACCATGAGAACCGCCCTGAGGGTGGACGGAAAGCCAGAATGGATCTATGCCACAAGGTGTTGGAGAGATCTACACAAGGGAAACAAGGACACGAAAGACGCCGAAAAGCAGTTGTGGCCAGGCGATTCTCCTGTGCAGCCATGTTTCTCCTTCTTGGCACAGgctaaaatacttaaaaattaGAAGATCACCTGAGCACGAGGCCTCAGTTGATTGCAATACAGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU309275 lncRNA downstream 78 14634110 ~ 14635577 (-) False grm8a
TU309249 lncRNA downstream 209163 14424237 ~ 14426492 (-) False waslb
TU309250 lncRNA downstream 209163 14426118 ~ 14426492 (-) False waslb
TU309114 lncRNA downstream 403849 14231543 ~ 14231806 (-) True G227814
XR_005638083.1 lncRNA downstream 416057 14178745 ~ 14219598 (-) True LOC120553016
TU309360 lncRNA upstream 126549 14769998 ~ 14770247 (-) True G228019
TU309361 lncRNA upstream 127049 14770498 ~ 14770967 (-) True G228020
TU309362 lncRNA upstream 130868 14774317 ~ 14774848 (-) True G228021
TU309363 lncRNA upstream 148796 14792245 ~ 14792469 (-) True G228022
TU309355 lncRNA upstream 403878 15047327 ~ 15053285 (-) False grm8a
XM_039791824.1 mRNA downstream 81790 14534878 ~ 14553865 (-) True gpr37b
XM_039791825.1 mRNA downstream 167248 14465755 ~ 14468407 (-) True LOC120553439
XM_039791691.1 mRNA downstream 185066 14426067 ~ 14450589 (-) True waslb
XM_039791677.1 mRNA downstream 229162 14401227 ~ 14406493 (-) True LOC120553349
XM_039791673.1 mRNA downstream 237876 14392392 ~ 14397779 (-) True LOC120553347
XM_039791868.1 mRNA upstream 150316 14793765 ~ 15047202 (-) False grm8a
XM_039791866.1 mRNA upstream 150316 14793765 ~ 15047202 (-) False grm8a
XM_039791867.1 mRNA upstream 150316 14793765 ~ 15047202 (-) False grm8a
XM_039792430.1 mRNA upstream 412026 15055475 ~ 15089983 (-) True znf800b
XM_039792003.1 mRNA upstream 450958 15094407 ~ 15126770 (-) True atxn7l1
unassigned_transcript_1491 other downstream 825976 13809607 ~ 13809679 (-) True trnak-cuu_13
TU308919 other downstream 976383 13651662 ~ 13659272 (-) True LOC120553486
TU308872 other downstream 1105877 13520265 ~ 13529778 (-) False LOC120553470
TU308500 other downstream 2347501 12284926 ~ 12288154 (-) True G227429
XR_005638137.1 other downstream 2786714 11838944 ~ 11848941 (-) False cracr2ab
TU309376 other upstream 416554 15060003 ~ 15061429 (-) False znf800b
TU309380 other upstream 418814 15062263 ~ 15088329 (-) False znf800b
TU309610 other upstream 1127789 15771238 ~ 15791853 (-) True G228191
TU309744 other upstream 2105393 16748842 ~ 16823432 (-) True G228291
TU309971 other upstream 2651673 17295122 ~ 17302198 (-) True G228465

Expression Profile