RNA id: TU309363



Basic Information


Item Value
RNA id TU309363
length 225
lncRNA type intronic
GC content 0.40
exon number 1
gene id G228022
representative True

Chromosome Information


Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 14792245 ~ 14792469 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tgactgaccttcatttgttaaagtaatgatggccactcgtttctctttacttagctgattggttcttgccataatatgaattctaacagttgtccaatagggctgttggctgtgtatcaacctgacttctgcacaacacaactgatggtcccaaccccattaataagggaaaatattccactaattaaccctgacaaggcacacctgtgaagtgaaaaccatttc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU309362 lncRNA downstream 17397 14774317 ~ 14774848 (-) True G228021
TU309361 lncRNA downstream 21278 14770498 ~ 14770967 (-) True G228020
TU309360 lncRNA downstream 21998 14769998 ~ 14770247 (-) True G228019
TU309356 lncRNA downstream 148796 14635655 ~ 14643449 (-) False grm8a
TU309275 lncRNA downstream 156668 14634110 ~ 14635577 (-) False grm8a
TU309355 lncRNA upstream 254858 15047327 ~ 15053285 (-) False grm8a
XR_005638141.1 lncRNA upstream 377174 15169643 ~ 15178955 (-) True LOC120553257
TU309413 lncRNA upstream 488997 15281466 ~ 15281669 (-) True G228063
TU309416 lncRNA upstream 497770 15290239 ~ 15290493 (-) True G228066
TU309417 lncRNA upstream 498405 15290874 ~ 15291223 (-) True G228067
XM_039791824.1 mRNA downstream 238380 14534878 ~ 14553865 (-) True gpr37b
XM_039791825.1 mRNA downstream 323838 14465755 ~ 14468407 (-) True LOC120553439
XM_039791691.1 mRNA downstream 341656 14426067 ~ 14450589 (-) True waslb
XM_039791677.1 mRNA downstream 385752 14401227 ~ 14406493 (-) True LOC120553349
XM_039791673.1 mRNA downstream 394466 14392392 ~ 14397779 (-) True LOC120553347
XM_039791868.1 mRNA upstream 1296 14793765 ~ 15047202 (-) False grm8a
XM_039791866.1 mRNA upstream 1296 14793765 ~ 15047202 (-) False grm8a
XM_039791867.1 mRNA upstream 1296 14793765 ~ 15047202 (-) False grm8a
XM_039792430.1 mRNA upstream 263006 15055475 ~ 15089983 (-) True znf800b
XM_039792003.1 mRNA upstream 301938 15094407 ~ 15126770 (-) True atxn7l1
unassigned_transcript_1491 other downstream 982566 13809607 ~ 13809679 (-) True trnak-cuu_13
TU308919 other downstream 1132973 13651662 ~ 13659272 (-) True LOC120553486
TU308872 other downstream 1262467 13520265 ~ 13529778 (-) False LOC120553470
TU308500 other downstream 2504091 12284926 ~ 12288154 (-) True G227429
XR_005638137.1 other downstream 2943304 11838944 ~ 11848941 (-) False cracr2ab
TU309376 other upstream 267534 15060003 ~ 15061429 (-) False znf800b
TU309380 other upstream 269794 15062263 ~ 15088329 (-) False znf800b
TU309610 other upstream 978769 15771238 ~ 15791853 (-) True G228191
TU309744 other upstream 1956373 16748842 ~ 16823432 (-) True G228291
TU309971 other upstream 2502653 17295122 ~ 17302198 (-) True G228465

Expression Profile