Item | Value |
---|---|
RNA id | XM_039792208.1 |
length | 2164 |
RNA type | mRNA |
GC content | 0.51 |
exon number | 5 |
gene id | lrrc17 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_053134.1 |
NCBI id | CM020931.1 |
chromosome length | 29109922 |
location | 15300522 ~ 15331178 (+) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
species | eurasian perch (Perca fluviatilis) |
id | description |
---|
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU309415 | lncRNA | upstream | 10014 | 15290187 ~ 15290508 (+) | True | G228065 |
TU309334 | lncRNA | upstream | 97481 | 15199075 ~ 15203041 (+) | False | LOC120553256 |
TU309330 | lncRNA | upstream | 134313 | 15154129 ~ 15166209 (+) | True | G227995 |
TU309300 | lncRNA | upstream | 155324 | 15141212 ~ 15145198 (+) | True | G227969 |
TU309304 | lncRNA | upstream | 239688 | 15060004 ~ 15060834 (+) | True | G227972 |
TU309453 | lncRNA | downstream | 140226 | 15471404 ~ 15471886 (+) | False | prickle1b |
TU309478 | lncRNA | downstream | 163511 | 15494689 ~ 15510679 (+) | True | yaf2 |
TU309479 | lncRNA | downstream | 163511 | 15494689 ~ 15510679 (+) | False | yaf2 |
TU309500 | lncRNA | downstream | 199953 | 15531131 ~ 15531439 (+) | True | G228119 |
TU309509 | lncRNA | downstream | 346177 | 15677355 ~ 15680269 (+) | True | G228128 |
XM_039791480.1 | mRNA | upstream | 44199 | 15246158 ~ 15256323 (+) | True | fgl2a |
XM_039791481.1 | mRNA | upstream | 44199 | 15246158 ~ 15256323 (+) | False | fgl2a |
XM_039791482.1 | mRNA | upstream | 45933 | 15246298 ~ 15254589 (+) | False | fgl2a |
XM_039791477.1 | mRNA | upstream | 100570 | 15168605 ~ 15199952 (+) | True | LOC120553256 |
XM_039791871.1 | mRNA | upstream | 546272 | 14750780 ~ 14754250 (+) | True | LOC120553461 |
XM_039792506.1 | mRNA | downstream | 7661 | 15338839 ~ 15345725 (+) | True | LOC120553796 |
XM_039792290.1 | mRNA | downstream | 29751 | 15360929 ~ 15368119 (+) | False | pus7l |
XM_039792289.1 | mRNA | downstream | 29763 | 15360941 ~ 15368119 (+) | False | pus7l |
XM_039792291.1 | mRNA | downstream | 29765 | 15360943 ~ 15368119 (+) | True | pus7l |
XM_039791539.1 | mRNA | downstream | 110807 | 15441985 ~ 15471887 (+) | False | prickle1b |
XR_005638140.1 | other | upstream | 102692 | 15168604 ~ 15197830 (+) | False | LOC120553256 |
TU309000 | other | upstream | 1295629 | 14002363 ~ 14004893 (+) | False | LOC120553485 |
TU309001 | other | upstream | 1295673 | 14002363 ~ 14004849 (+) | False | LOC120553485 |
unassigned_transcript_1494 | other | upstream | 1465521 | 13834929 ~ 13835001 (+) | True | trnak-cuu_14 |
unassigned_transcript_1493 | other | upstream | 1466191 | 13834221 ~ 13834331 (+) | True | trnal-caa_24 |
XR_005638118.1 | other | downstream | 1439880 | 16771058 ~ 16831243 (+) | False | cald1a |
XR_005638117.1 | other | downstream | 1439884 | 16771062 ~ 16831243 (+) | False | cald1a |
TU309802 | other | downstream | 1588485 | 16919663 ~ 16922823 (+) | True | G228335 |
unassigned_transcript_1495 | other | downstream | 2258913 | 17590091 ~ 17590163 (+) | True | trnak-cuu_15 |
TU310117 | other | downstream | 3198987 | 18530165 ~ 18531168 (+) | False | srr |