RNA id: XM_039791557.1


Basic Information

Item Value
RNA id XM_039791557.1
length 4553
RNA type mRNA
GC content 0.45
exon number 14
gene id slc37a3
representative True

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 17007724 ~ 17020735 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AGCGACGCGTCTGTTACACAGGAATCCACAGTAAACACAGACTGTCGCCACACCGAGAACAAGCCAGCTAACGATTACACGAGCAGAAAGTGATGTGCTTGTCTCATCTGGCATAGTGGGACACTATAACTGAACCCGCTCCCTGTCCTGTTGCTGTTCCCCCTGAAGACAtccaccaccacccccacctCCCTATCTcgtcctccacctcctcttACCTCCCCCCGGCCGCCCCTGTGATGCCTCCCCCGTGCTGTGGCTACCTGTCACAGTACACTCATCATCATCTGGTTGTCTTCCTCCTCACCTTTTTTAGCTATGTGTTGCTACATGCGTCCAGAAAGACGTTCAGTAATGTGAAAGTCAGCATCTCAGCCCAGTGGACACCGGCTTTCCAGAATGGCAGCGCACCAGCTTTCTCTCCTGGCGAGACATGGGAGGAAAATCGTCTGTTTGAGGATGAAGAGCAGGCCACTTTGTTCCTGGGAGCTCTGGACTCCATCTTCCTTTTTTCATATGCAGTGGGTCTGTATCTCAGCGGTGTGATTGGGGACAGAGTGAACCTGCGCTACGTGCTCTGTTTCGGCCTGTGTGGCTCTGCTGTAGTGgagTTTCTGTTTGGCACTCTCACCGAATGGCTCCACATCTACAACGTCTATCTGTACTGTGGCCTGTGGGTGCTGAACGGCCTGCTGCAATCAGCTGTCTGGCCCTGCGTGGTGGCCGTCATGGGCAACTGGTTCGGCAAGGCTGGcCGTGGCTTTGTCTTTGGCCTGTGGAGTGCTTGTGCCTCTGTAGGCAACATCCTGGGGGCCTTCCTGGCTTCTAGCGTGCTCAAGTATGGATATGAgTATGCCTTCCTGGTGACCTCAGTGGTGCAGTTTGCCGGGGGGGTGGTGGTGTTCTTCGGCCTACTTACCTCCCCAAAAGAAGTCGGTTTGAGCTTGGAGTCAGAGACTGGACTCAGTCCGGTGGAGAGGGACACAGACAGCCACAGGCCTTTGATGAGCGACGAGGAGGATGAGGCGGAGGCGGAGGCGTACGCCAGACAATACCAGTCAGTTCAGCAGCCGGACGAACCTCTGGCCGAGGCTCCTCGAGCCATTGGCTTCTGCCAGGCTTTCTGTCTGCCTGGCGTGCTACCTTATTCCCTGGCGTATGCGTGTCTGAAGCTGGTCAACTACTCCTTCTTCTTCTGGCTTCCTTTCTACCTGAGCAACAACTACGGCTGGAAGGAGGCCGAGGCCGACCGCCTCTCTGTGTGGTATGATGTCGGAGGAATCATCGGAGGGACCGTTCAGGGTTTGATTTCAGATTGCATGGGAAAGAGAGCCCCTGTGTTGGCCATGAGCCTGGCACTGGCGATGGGAGCCCTGATGGGATACAGCCGCTCACCGAATGACCAGGTGATAAACGCAGCGCTGTTGGCTACCACTGGCTTCTTCATCGGCGGCCCGTCTAATATGATCAGCTCTGCCATATCTGCTGACCTGGGGAGACAGGGGGCTCTGAGGGGCAATCAGGAGGCACTGGCTACTGTCACTGGCATAGTGGACGGAACAGGAAGTATAGGAGCTGCAGGGGGACAGTACCTGGTGTCCCTGATTGAGAGCAAGCTGGGCTGGATGTATGTGTTCTACTTCTTCATCGTCATGACGGGGTCCAGCATTGTGTTCATCATTCCCTTGCTCTTTAAAGAGGTGCTTGCCATGTGGAGAGACAGACAAGCGTTGCGGCGCCAGCTGTGAACACGTCAACATCTGCCAGCCATAATGTTCCCACTCTTATCAGTGGCAACACAGCAGGGCTGCTCACAAACAGCTGCTTTTAGGTGAGTTTCGCAAGGTATAAAGATTTGTGGGACGTTCTCACAGCCACCGTGGTTTAAGGTGACCTAGAGTTACAGAGCCACCAGTTAAACTCCCACAACGACCAGCGTTTGTCTATTAACACCCATGTGAGCAGGCACCGAGTCTTTGAGCACAACTCTGAAATCGTATCCACTCACTAAAAGCCTAGAAATGCAAATGCACACTTCTTTTAGCGTGAATCCGAGGATTTCTAGGTTGAGCTGAACTGATCGAAAAAGGCTTTACAAGGGACCTAGCTGTCCAGTCTGTGAATTCAGGCCttgcagggccatcacagaatgtactactgtatatattttaggatttaaatttatgtaaaaacctttttaaaagagATGCTCCtaatttaagttcaataatgTTTGGCCTTTTAGATTAGAAGTTCTTAACTTAAAGACCCCTTTGGGATAATTTGGGTGTCAAGAGTGTCTAAAGAATGTGAATATGAATTGTAATGTAGAAATTTTATCGTCAGCTTTTGTAGATATGTATGATctagggatgggcatgattAATCGACGATCGATAATTGATTATTAAGAATTTTGTCTGACGTTAATTTGTCATTGATTAAACTAATGCTGGTTGCGTTGCGTAGTGTGAGTCTTGAagcaattaaattaatttcacagtgtggcagcaattaaacattttaccacTCTGGGGCAATATTTGACTCCATACTCAAGTTACCTGGCTGCGAGTTTCcgttttgatttcaaaagtaatcatgaAGAGGACACGGCGAAGTGTGGCgtgggaccttttttttttttttttttaaacgatttaGTTCACGGCAAACACTGAGATGCCGTGTATAAGTACAACACGGCCACGACTCAAATGATGTAGCCTACCCAAGGGACCTGCAAGTTCAttgagatggatattggaaccaGCATATCACATTCAGTCACGACGTACCATCACCAGACTGGTAGAAACTCACTAGGAAGAACGGAATAAGGTTCCCCAGGCTGGCCAAGTTAGCGCGGAGGTACCTGCGCATCCCAGCAACGCAGGTGTTTTCGGCGGCTGGACTATCAGTCACCAGGTAGCGGTCGCGTCTCACCCCAGATGATGTCAACATGCTTATCTTTCTCAACGCACATCAGTAGACTGGTGCAGAAGTTGTATCTGAGTTAGCCTactggttattttttattaggctTTGTCCCGTGCCTTGGATAGTTTTGAGTTACATTCTGTTTAAGAACGCCGGCTCGCAGCTAcaggttctgctgcttcagagcGCCGCACCGCAGCGCATATATttataatctatatctatatctataacgtccagtttaactgccacaagttgttcttcttgtaattaagatctcatcgaggaaaaacacgctgtatttttgtattttcattgtatttttaatttataaaaagttaaataaataatgaattttaatataaaaatattaatgattaatcgatagtcGATCGTTAATTCTCCCGACGATCGACGaagaaaatgtaatcgaatgcccatccctagtatgatctttttgttgttttcggTCGAGATAATGAATATTGCACTGTAGTACAGTAGGCAAAGTCTGGAAGATTTTAGTGAACCACTCAGATCTTAGCTTGGTTTCTCTTGTGTACAGTGTTGTGTAATCAGGGTTAGAAGCTATACTGTCTGCGGGGACTGGTTCTCTCGattctgtgtatgtgtcagtCACTGATTGATTTACTGTATGCTCATTCCTTTTTCAAGTTTTAGTGTCTTAAGTCACATGCAATTGCCATGAAAACCCACATGTGATATGTGATATAAACACAATAAGAAAAATCTACCATTGCCTGACCCATTAAGTTTACAGTGTAGCATGCCTAATGCACTTTAAAGTGTAAACTGCATACTGACATTGCAGAAGAGACACATGTTGCCTGTTTGTAGCAGGAGCTGCACCTTCTCACGGTTGTTTGGGGAACTTGACTGCCAATCTGTGTCTGAACAGATTTAAAGGCCAATAAAGGTAAATTACTCATGATCAGGGTGGGCAAAGGTCATACAGTATAACACCAGCCATATGCTAGTTAATAATTGGGCAGGTTGTCTACTTTACTAGACACTGCGGTCAGTAACCAGCCATCATTTTGGGGGAAGATTGTTTTGGTTCAaatcaggaaaaaaaactagaatatgtaattttttttttttttattataatttttttttctttcagccaCTGTGGCCAGTAGACACAACATTTTAGTTTGCTCTGTTGCATGTCGACCATTGAAAGTACTTTTAACATCTGTGACAGCAGGGCATCTTTGTATCATCATTACTGGTATGAGATGTGTTTCTTATGCTAAACCAAGAGCACTGGAGCATAAAATGAGACTACACCTCCGATGTCTCTGAACTTGCAGAGTGTAATAGAATGTAAATTGAAATGTTTGTGGAATGTGTAACCCTATCTGtggtgtatttattttgttttatgtactttttgagttttaacttgtgtAAATGcaaattttcctttttaaataaatgtaaggtACATTTGGCAAATTGCGAGTTATCTACAGAATATTTCAGATAAGATAGTGATGGTATCGGtggatttttattgttttacaatTTTGGTCTTGTAACTGTTTCCTTtctaaactttatttattaaagcgctcatattttgctca

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005215 transporter activity molecular_function

KEGG:

id description
K03447 SLC37A3; MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU309840 lncRNA downstream 724 16952943 ~ 17007000 (-) False G228363
TU309837 lncRNA downstream 724 17004002 ~ 17007000 (-) True G228363
TU309834 lncRNA downstream 57918 16914607 ~ 16949806 (-) True G228360
TU309755 lncRNA downstream 176485 16824829 ~ 16831239 (-) True G228295
TU309741 lncRNA downstream 260684 16746743 ~ 16747040 (-) True G228290
TU309887 lncRNA upstream 116535 17137270 ~ 17138275 (-) True G228401
TU309917 lncRNA upstream 200470 17221205 ~ 17222228 (-) True G228423
TU309936 lncRNA upstream 222730 17243465 ~ 17243980 (-) True G228439
TU309981 lncRNA upstream 252213 17272948 ~ 17275477 (-) True G228474
XR_005638072.1 lncRNA upstream 381513 17402248 ~ 17402832 (-) True LOC120552976
XM_039791555.1 mRNA downstream 20169 16983903 ~ 16987555 (-) True sapcd1
XM_039791552.1 mRNA downstream 28689 16972532 ~ 16979035 (-) True prdm4
XM_039791554.1 mRNA downstream 35277 16965571 ~ 16972447 (-) True tmem209
XM_039791553.1 mRNA downstream 42780 16917305 ~ 16964944 (-) True ahcyl2b
XM_039791549.1 mRNA downstream 95097 16882811 ~ 16912627 (-) False strip2
XM_039792344.1 mRNA upstream 88802 17109537 ~ 17112443 (-) True LOC120553682
XM_039791082.1 mRNA upstream 93273 17114008 ~ 17116453 (-) True cdpf1
XM_039791719.1 mRNA upstream 96018 17116753 ~ 17135130 (-) True pparaa
XM_039791800.1 mRNA upstream 176206 17196941 ~ 17207454 (-) True atxn10
XM_039792327.1 mRNA upstream 187891 17208626 ~ 17220355 (-) True LOC120553673
TU309744 other downstream 184292 16748842 ~ 16823432 (-) True G228291
TU309610 other downstream 1215871 15771238 ~ 15791853 (-) True G228191
TU309380 other downstream 1919395 15062263 ~ 15088329 (-) False znf800b
TU309376 other downstream 1946295 15060003 ~ 15061429 (-) False znf800b
unassigned_transcript_1491 other downstream 3198045 13809607 ~ 13809679 (-) True trnak-cuu_13
TU309971 other upstream 274387 17295122 ~ 17302198 (-) True G228465
TU310227 other upstream 809937 17830672 ~ 17927705 (-) False tafa5a
TU310229 other upstream 809937 17830672 ~ 18100995 (-) False tafa5a
XR_005638136.1 other upstream 1348940 18369675 ~ 18421407 (-) False gramd4a
unassigned_transcript_1496 other upstream 2417782 19438517 ~ 19438599 (-) True trnal-cag_18

Expression Profile