Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU309887 |
| length | 1006 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G228401 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053134.1 |
| NCBI id | CM020931.1 |
| chromosome length | 29109922 |
| location | 17137270 ~ 17138275 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU309843 | lncRNA | downstream | 127680 | 17007945 ~ 17009590 (-) | False | slc37a3 |
| TU309844 | lncRNA | downstream | 128289 | 17007749 ~ 17008981 (-) | False | slc37a3 |
| TU309840 | lncRNA | downstream | 130270 | 16952943 ~ 17007000 (-) | False | G228363 |
| TU309837 | lncRNA | downstream | 130270 | 17004002 ~ 17007000 (-) | True | G228363 |
| TU309834 | lncRNA | downstream | 187464 | 16914607 ~ 16949806 (-) | True | G228360 |
| TU309917 | lncRNA | upstream | 82930 | 17221205 ~ 17222228 (-) | True | G228423 |
| TU309936 | lncRNA | upstream | 105190 | 17243465 ~ 17243980 (-) | True | G228439 |
| TU309981 | lncRNA | upstream | 134673 | 17272948 ~ 17275477 (-) | True | G228474 |
| XR_005638072.1 | lncRNA | upstream | 263973 | 17402248 ~ 17402832 (-) | True | LOC120552976 |
| TU310039 | lncRNA | upstream | 379388 | 17517663 ~ 17600185 (-) | True | G228522 |
| XM_039791719.1 | mRNA | downstream | 2140 | 17116753 ~ 17135130 (-) | True | pparaa |
| XM_039791082.1 | mRNA | downstream | 20817 | 17114008 ~ 17116453 (-) | True | cdpf1 |
| XM_039792344.1 | mRNA | downstream | 24827 | 17109537 ~ 17112443 (-) | True | LOC120553682 |
| XM_039791557.1 | mRNA | downstream | 116535 | 17007724 ~ 17020735 (-) | True | slc37a3 |
| XM_039791555.1 | mRNA | downstream | 149715 | 16983903 ~ 16987555 (-) | True | sapcd1 |
| XM_039791800.1 | mRNA | upstream | 58666 | 17196941 ~ 17207454 (-) | True | atxn10 |
| XM_039792327.1 | mRNA | upstream | 70351 | 17208626 ~ 17220355 (-) | True | LOC120553673 |
| XM_039792328.1 | mRNA | upstream | 74373 | 17212648 ~ 17220357 (-) | False | LOC120553673 |
| XM_039791154.1 | mRNA | upstream | 84059 | 17222334 ~ 17234693 (-) | False | trim24 |
| XM_039791152.1 | mRNA | upstream | 84059 | 17222334 ~ 17234692 (-) | True | trim24 |
| TU309744 | other | downstream | 313838 | 16748842 ~ 16823432 (-) | True | G228291 |
| TU309610 | other | downstream | 1345417 | 15771238 ~ 15791853 (-) | True | G228191 |
| TU309380 | other | downstream | 2048941 | 15062263 ~ 15088329 (-) | False | znf800b |
| TU309376 | other | downstream | 2075841 | 15060003 ~ 15061429 (-) | False | znf800b |
| unassigned_transcript_1491 | other | downstream | 3327591 | 13809607 ~ 13809679 (-) | True | trnak-cuu_13 |
| TU309971 | other | upstream | 156847 | 17295122 ~ 17302198 (-) | True | G228465 |
| TU310227 | other | upstream | 692397 | 17830672 ~ 17927705 (-) | False | tafa5a |
| TU310229 | other | upstream | 692397 | 17830672 ~ 18100995 (-) | False | tafa5a |
| XR_005638136.1 | other | upstream | 1231400 | 18369675 ~ 18421407 (-) | False | gramd4a |
| unassigned_transcript_1496 | other | upstream | 2300242 | 19438517 ~ 19438599 (-) | True | trnal-cag_18 |
