Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005638127.1 |
| length | 366 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 3 |
| gene id | LOC120553191 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053134.1 |
| NCBI id | CM020931.1 |
| chromosome length | 29109922 |
| location | 18304585 ~ 18346997 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU310039 | lncRNA | downstream | 705375 | 17517663 ~ 17600185 (-) | True | G228522 |
| XR_005638072.1 | lncRNA | downstream | 902728 | 17402248 ~ 17402832 (-) | True | LOC120552976 |
| TU309981 | lncRNA | downstream | 1030083 | 17272948 ~ 17275477 (-) | True | G228474 |
| TU309936 | lncRNA | downstream | 1061580 | 17243465 ~ 17243980 (-) | True | G228439 |
| TU309917 | lncRNA | downstream | 1083332 | 17221205 ~ 17222228 (-) | True | G228423 |
| TU310249 | lncRNA | upstream | 51512 | 18363259 ~ 18369744 (-) | False | gramd4a |
| TU310257 | lncRNA | upstream | 244306 | 18556053 ~ 18558509 (-) | True | G228684 |
| TU310256 | lncRNA | upstream | 246854 | 18558601 ~ 18559279 (-) | True | G228683 |
| TU310292 | lncRNA | upstream | 426649 | 18738396 ~ 18739510 (-) | False | LOC120553633 |
| TU310303 | lncRNA | upstream | 569414 | 18881161 ~ 18884075 (-) | True | G228713 |
| XM_039791347.1 | mRNA | downstream | 34809 | 18134084 ~ 18270751 (-) | True | tbc1d22a |
| XM_039791348.1 | mRNA | downstream | 34809 | 18134084 ~ 18270751 (-) | False | tbc1d22a |
| XM_039792281.1 | mRNA | downstream | 327519 | 17830616 ~ 17978041 (-) | True | tafa5a |
| XM_039792282.1 | mRNA | downstream | 377681 | 17830616 ~ 17927879 (-) | False | tafa5a |
| XM_039791140.1 | mRNA | downstream | 721677 | 17576138 ~ 17583883 (-) | True | zbed4 |
| XM_039791423.1 | mRNA | upstream | 51941 | 18363688 ~ 18421404 (-) | False | gramd4a |
| XM_039791425.1 | mRNA | upstream | 51941 | 18363688 ~ 18421403 (-) | False | gramd4a |
| XM_039791422.1 | mRNA | upstream | 51941 | 18363688 ~ 18421403 (-) | True | gramd4a |
| XM_039791424.1 | mRNA | upstream | 51941 | 18363688 ~ 18421402 (-) | False | gramd4a |
| XM_039791427.1 | mRNA | upstream | 51941 | 18363688 ~ 18404820 (-) | False | gramd4a |
| TU310229 | other | downstream | 204565 | 17830672 ~ 18100995 (-) | False | tafa5a |
| TU310227 | other | downstream | 377855 | 17830672 ~ 17927705 (-) | False | tafa5a |
| TU309971 | other | downstream | 1003362 | 17295122 ~ 17302198 (-) | True | G228465 |
| TU309744 | other | downstream | 1482128 | 16748842 ~ 16823432 (-) | True | G228291 |
| TU309610 | other | downstream | 2513707 | 15771238 ~ 15791853 (-) | True | G228191 |
| XR_005638136.1 | other | upstream | 57928 | 18369675 ~ 18421407 (-) | False | gramd4a |
| unassigned_transcript_1496 | other | upstream | 1126770 | 19438517 ~ 19438599 (-) | True | trnal-cag_18 |
| unassigned_transcript_1497 | other | upstream | 1131485 | 19443232 ~ 19443314 (-) | True | trnal-cag_19 |
| unassigned_transcript_1498 | other | upstream | 1135274 | 19447021 ~ 19447103 (-) | True | trnal-cag_20 |
| unassigned_transcript_1499 | other | upstream | 1136317 | 19448064 ~ 19448146 (-) | True | trnal-cag_21 |
