Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU310303 |
| length | 840 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 4 |
| gene id | G228713 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053134.1 |
| NCBI id | CM020931.1 |
| chromosome length | 29109922 |
| location | 18881161 ~ 18884075 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU310292 | lncRNA | downstream | 141651 | 18738396 ~ 18739510 (-) | False | LOC120553633 |
| TU310256 | lncRNA | downstream | 321882 | 18558601 ~ 18559279 (-) | True | G228683 |
| TU310257 | lncRNA | downstream | 322652 | 18556053 ~ 18558509 (-) | True | G228684 |
| TU310249 | lncRNA | downstream | 511417 | 18363259 ~ 18369744 (-) | False | gramd4a |
| TU310251 | lncRNA | downstream | 534164 | 18304585 ~ 18346997 (-) | True | LOC120553191 |
| TU310334 | lncRNA | upstream | 9565 | 18893640 ~ 18975820 (-) | True | G228731 |
| TU310370 | lncRNA | upstream | 130580 | 19014655 ~ 19022242 (-) | True | G228759 |
| TU310342 | lncRNA | upstream | 277942 | 19162017 ~ 19270336 (-) | False | sox5 |
| TU310454 | lncRNA | upstream | 442546 | 19326621 ~ 19328343 (-) | True | G228824 |
| TU310457 | lncRNA | upstream | 448566 | 19332641 ~ 19336028 (-) | True | G228826 |
| XM_039792263.1 | mRNA | downstream | 58071 | 18738508 ~ 18823090 (-) | True | LOC120553633 |
| XM_039792262.1 | mRNA | downstream | 149495 | 18711014 ~ 18731666 (-) | True | LOC120553632 |
| XM_039791682.1 | mRNA | downstream | 175924 | 18667121 ~ 18705237 (-) | False | LOC120553351 |
| XM_039791407.1 | mRNA | upstream | 144534 | 19028609 ~ 19270239 (-) | False | sox5 |
| XM_039791408.1 | mRNA | upstream | 144534 | 19028609 ~ 19270239 (-) | False | sox5 |
| XM_039791404.1 | mRNA | upstream | 144534 | 19028609 ~ 19270239 (-) | False | sox5 |
| XM_039791405.1 | mRNA | upstream | 144534 | 19028609 ~ 19270239 (-) | True | sox5 |
| XM_039791413.1 | mRNA | upstream | 144534 | 19028609 ~ 19116957 (-) | False | sox5 |
| XR_005638136.1 | other | downstream | 459754 | 18369675 ~ 18421407 (-) | False | gramd4a |
| TU310229 | other | downstream | 780166 | 17830672 ~ 18100995 (-) | False | tafa5a |
| TU310227 | other | downstream | 953456 | 17830672 ~ 17927705 (-) | False | tafa5a |
| TU309971 | other | downstream | 1578963 | 17295122 ~ 17302198 (-) | True | G228465 |
| TU309744 | other | downstream | 2057729 | 16748842 ~ 16823432 (-) | True | G228291 |
| unassigned_transcript_1496 | other | upstream | 554442 | 19438517 ~ 19438599 (-) | True | trnal-cag_18 |
| unassigned_transcript_1497 | other | upstream | 559157 | 19443232 ~ 19443314 (-) | True | trnal-cag_19 |
| unassigned_transcript_1498 | other | upstream | 562946 | 19447021 ~ 19447103 (-) | True | trnal-cag_20 |
| unassigned_transcript_1499 | other | upstream | 563989 | 19448064 ~ 19448146 (-) | True | trnal-cag_21 |
| unassigned_transcript_1500 | other | upstream | 567913 | 19451988 ~ 19452073 (-) | True | trnal-cag_22 |
