Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU310342 |
| length | 652 |
| lncRNA type | sense_over |
| GC content | 0.52 |
| exon number | 5 |
| gene id | sox5 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053134.1 |
| NCBI id | CM020931.1 |
| chromosome length | 29109922 |
| location | 19028609 ~ 19270336 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU310370 | lncRNA | downstream | 139775 | 19014655 ~ 19022242 (-) | True | G228759 |
| TU310334 | lncRNA | downstream | 186197 | 18893640 ~ 18975820 (-) | True | G228731 |
| TU310303 | lncRNA | downstream | 277942 | 18881161 ~ 18884075 (-) | True | G228713 |
| TU310292 | lncRNA | downstream | 422507 | 18738396 ~ 18739510 (-) | False | LOC120553633 |
| TU310256 | lncRNA | downstream | 602738 | 18558601 ~ 18559279 (-) | True | G228683 |
| TU310454 | lncRNA | upstream | 56285 | 19326621 ~ 19328343 (-) | True | G228824 |
| TU310457 | lncRNA | upstream | 62305 | 19332641 ~ 19336028 (-) | True | G228826 |
| TU310474 | lncRNA | upstream | 92836 | 19363172 ~ 19363381 (-) | True | G228834 |
| TU310475 | lncRNA | upstream | 93820 | 19364156 ~ 19364416 (-) | True | G228835 |
| TU310476 | lncRNA | upstream | 94788 | 19365124 ~ 19365528 (-) | True | G228836 |
| XM_039791413.1 | mRNA | downstream | 45060 | 19028609 ~ 19116957 (-) | False | sox5 |
| XM_039791410.1 | mRNA | downstream | 45060 | 19028609 ~ 19116957 (-) | False | sox5 |
| XM_039791402.1 | mRNA | downstream | 45060 | 19028609 ~ 19116957 (-) | False | sox5 |
| XM_039791412.1 | mRNA | downstream | 45060 | 19028609 ~ 19116957 (-) | False | sox5 |
| XM_039791411.1 | mRNA | downstream | 45060 | 19028609 ~ 19116957 (-) | False | sox5 |
| XM_039791267.1 | mRNA | upstream | 27586 | 19297922 ~ 19309684 (-) | True | bcat1 |
| XM_039791268.1 | mRNA | upstream | 27586 | 19297922 ~ 19309593 (-) | False | bcat1 |
| XM_039791261.1 | mRNA | upstream | 75982 | 19346318 ~ 19353490 (-) | True | dnai7 |
| XM_039791263.1 | mRNA | upstream | 76046 | 19346382 ~ 19353491 (-) | False | dnai7 |
| XM_039791262.1 | mRNA | upstream | 76046 | 19346382 ~ 19353490 (-) | False | dnai7 |
| XR_005638136.1 | other | downstream | 740610 | 18369675 ~ 18421407 (-) | False | gramd4a |
| TU310229 | other | downstream | 1061022 | 17830672 ~ 18100995 (-) | False | tafa5a |
| TU310227 | other | downstream | 1234312 | 17830672 ~ 17927705 (-) | False | tafa5a |
| TU309971 | other | downstream | 1859819 | 17295122 ~ 17302198 (-) | True | G228465 |
| TU309744 | other | downstream | 2338585 | 16748842 ~ 16823432 (-) | True | G228291 |
| unassigned_transcript_1496 | other | upstream | 168181 | 19438517 ~ 19438599 (-) | True | trnal-cag_18 |
| unassigned_transcript_1497 | other | upstream | 172896 | 19443232 ~ 19443314 (-) | True | trnal-cag_19 |
| unassigned_transcript_1498 | other | upstream | 176685 | 19447021 ~ 19447103 (-) | True | trnal-cag_20 |
| unassigned_transcript_1499 | other | upstream | 177728 | 19448064 ~ 19448146 (-) | True | trnal-cag_21 |
| unassigned_transcript_1500 | other | upstream | 181652 | 19451988 ~ 19452073 (-) | True | trnal-cag_22 |
