Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU310390 |
| length | 989 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 3 |
| gene id | LOC120553164 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053134.1 |
| NCBI id | CM020931.1 |
| chromosome length | 29109922 |
| location | 19352983 ~ 19355551 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_005638159.1 | lncRNA | upstream | 444123 | 18905236 ~ 18908881 (+) | True | LOC120553381 |
| XR_005638160.1 | lncRNA | upstream | 455477 | 18892174 ~ 18897527 (+) | True | LOC120553383 |
| TU310196 | lncRNA | upstream | 497690 | 18850047 ~ 18855314 (+) | False | LOC120553630 |
| TU310155 | lncRNA | upstream | 613520 | 18738484 ~ 18739484 (+) | True | G228622 |
| TU310143 | lncRNA | upstream | 675439 | 18676351 ~ 18677565 (+) | True | G228611 |
| TU310405 | lncRNA | downstream | 65900 | 19420372 ~ 19420829 (+) | True | G228787 |
| XR_005638191.1 | lncRNA | downstream | 169603 | 19524075 ~ 19559043 (+) | True | LOC120553618 |
| TU310544 | lncRNA | downstream | 339561 | 19694033 ~ 19819189 (+) | False | LOC120553210 |
| TU310546 | lncRNA | downstream | 339561 | 19694033 ~ 19839382 (+) | False | LOC120553210 |
| TU310548 | lncRNA | downstream | 339561 | 19694033 ~ 19732007 (+) | False | LOC120553210 |
| XM_039791260.1 | mRNA | upstream | 6724 | 19311505 ~ 19346280 (+) | True | LOC120553161 |
| XM_039791100.1 | mRNA | upstream | 378364 | 18961085 ~ 18974640 (+) | True | etnk1 |
| XM_039791098.1 | mRNA | upstream | 393156 | 18951283 ~ 18959848 (+) | True | pyroxd1 |
| XM_039791099.1 | mRNA | upstream | 393156 | 18951283 ~ 18959848 (+) | False | pyroxd1 |
| XM_039791725.1 | mRNA | upstream | 404489 | 18946158 ~ 18948515 (+) | True | LOC120553379 |
| XM_039791043.1 | mRNA | downstream | 9731 | 19364203 ~ 19396806 (+) | True | utp20 |
| XM_039792101.1 | mRNA | downstream | 100352 | 19454824 ~ 19470973 (+) | True | mapk11 |
| XM_039792102.1 | mRNA | downstream | 100352 | 19454824 ~ 19468180 (+) | False | mapk11 |
| XM_039792511.1 | mRNA | downstream | 118678 | 19473150 ~ 19479275 (+) | True | LOC120553798 |
| XM_039792512.1 | mRNA | downstream | 124445 | 19478917 ~ 19483152 (+) | True | LOC120553799 |
| TU310117 | other | upstream | 821836 | 18530165 ~ 18531168 (+) | False | srr |
| unassigned_transcript_1495 | other | upstream | 1762841 | 17590091 ~ 17590163 (+) | True | trnak-cuu_15 |
| TU309802 | other | upstream | 2430181 | 16919663 ~ 16922823 (+) | True | G228335 |
| XR_005638118.1 | other | upstream | 2521761 | 16771058 ~ 16831243 (+) | False | cald1a |
| TU310402 | other | downstream | 56018 | 19410490 ~ 19413704 (+) | True | G228784 |
| unassigned_transcript_1503 | other | downstream | 104611 | 19459083 ~ 19459154 (+) | True | trnaq-uug_5 |
| XR_005638131.1 | other | downstream | 277475 | 19631947 ~ 19808412 (+) | False | LOC120553210 |
| XR_005638132.1 | other | downstream | 277475 | 19631947 ~ 19808412 (+) | False | LOC120553210 |
| TU310593 | other | downstream | 627776 | 19982248 ~ 19985648 (+) | True | G228924 |
