RNA id: TU311069



Basic Information


Item Value
RNA id TU311069
length 312
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G229296
representative True

Chromosome Information


Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 21264501 ~ 21264812 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AAGGACacaaattttctttgtgaatgaatcatgtatcgtaaataaataaatgttcttccttaaaatacagggggcataagtaagtacacccctatgttaaattcccatagaggcaggcagatgtttatttttaaaggccagttatttcatggatccaggataatatgcatcctgataaagttcccttggcctttggaattaaaatagccccacatcatcacatacccttcaccatacctagagattggcatggggtactttccataaaatcatctctcaatgcaaatcaaaccagctattaggctaactgac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU310999 lncRNA downstream 65242 21198468 ~ 21199259 (-) True G229248
TU310982 lncRNA downstream 202065 21019259 ~ 21062436 (-) True G229235
TU310983 lncRNA downstream 202065 21019259 ~ 21062436 (-) False G229235
TU310905 lncRNA downstream 396972 20867300 ~ 20867529 (-) True G229172
TU310901 lncRNA downstream 484593 20779683 ~ 20779908 (-) True G229168
TU311129 lncRNA upstream 185651 21450463 ~ 21453152 (-) True G229351
TU311131 lncRNA upstream 185651 21450463 ~ 21453152 (-) False G229351
TU311122 lncRNA upstream 196264 21461076 ~ 21461460 (-) False slc38a2
TU311121 lncRNA upstream 196325 21461137 ~ 21461460 (-) False slc38a2
TU311185 lncRNA upstream 377703 21642515 ~ 21642768 (-) True G229390
XM_039792116.1 mRNA downstream 2799 21234254 ~ 21261702 (-) False LOC120553569
XM_039792115.1 mRNA downstream 2799 21234254 ~ 21261702 (-) False LOC120553569
XM_039792114.1 mRNA downstream 2799 21234254 ~ 21261702 (-) False LOC120553569
XM_039792113.1 mRNA downstream 2799 21234254 ~ 21261702 (-) False LOC120553569
XM_039792112.1 mRNA downstream 2799 21234254 ~ 21261702 (-) False LOC120553569
XM_039791727.1 mRNA upstream 5062 21269874 ~ 21293236 (-) True LOC120553384
XM_039791881.1 mRNA upstream 30701 21295513 ~ 21301256 (-) True med21
XM_039792072.1 mRNA upstream 70725 21335537 ~ 21365108 (-) False gas2l3
XM_039792073.1 mRNA upstream 70725 21335537 ~ 21353473 (-) True gas2l3
XM_039792251.1 mRNA upstream 196325 21461137 ~ 21474602 (-) True slc38a2
XR_005638087.1 other downstream 118968 21063691 ~ 21145533 (-) False ptprz1b
TU310933 other downstream 306281 20957657 ~ 20958220 (-) True G229199
TU310704 other downstream 1142162 20067036 ~ 20122339 (-) False rerg
TU310602 other downstream 1425199 19811245 ~ 19839302 (-) False etv6
TU311312 other upstream 506276 21771088 ~ 21811031 (-) False LOC120553090
TU311319 other upstream 506324 21771136 ~ 21811097 (-) False LOC120553090
TU311637 other upstream 1839948 23104760 ~ 23239573 (-) True G229716
TU311825 other upstream 2427209 23692021 ~ 23711795 (-) True LOC120553170
TU311851 other upstream 2434885 23699697 ~ 23700198 (-) True G229907

Expression Profile