RNA id: TU311185



Basic Information


Item Value
RNA id TU311185
length 254
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G229390
representative True

Chromosome Information


Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 21642515 ~ 21642768 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GTTGCTTTTGAGTAGGATTGTGTTTGAGTGACTGATGAAGCCCATTGCAAGTCAGAGCATTCCAGGGGGTTCTCTGAAAAGGGGAAAataatttgaggtactttaagcaatttaacattagctaaaaTTGGACCAAAATGAATTTAAGATTCTTAGGGGGTTTTTCAATGGATCATTTGGTAgatatatttggcatttttgtgtATCTTGACTCAAAattggtttgtttttcactaaaaatgataaataacagg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU311122 lncRNA downstream 181055 21461076 ~ 21461460 (-) False slc38a2
TU311121 lncRNA downstream 181055 21461137 ~ 21461460 (-) False slc38a2
TU311129 lncRNA downstream 189363 21450463 ~ 21453152 (-) True G229351
TU311131 lncRNA downstream 189363 21450463 ~ 21453152 (-) False G229351
TU311069 lncRNA downstream 377703 21264501 ~ 21264812 (-) True G229296
TU311187 lncRNA upstream 13134 21655902 ~ 21656162 (-) True G229392
TU311216 lncRNA upstream 38792 21681560 ~ 21682539 (-) True G229413
TU311214 lncRNA upstream 38845 21681613 ~ 21682466 (-) False G229413
XR_005638095.1 lncRNA upstream 134265 21777033 ~ 21777676 (-) True LOC120553093
TU311375 lncRNA upstream 211615 21854383 ~ 21856289 (-) True G229527
XM_039792250.1 mRNA downstream 71402 21518625 ~ 21571113 (-) False slc38a4
XM_039792248.1 mRNA downstream 92448 21518625 ~ 21550067 (-) True slc38a4
XM_039792251.1 mRNA downstream 167913 21461137 ~ 21474602 (-) True slc38a2
XM_039792072.1 mRNA downstream 277407 21335537 ~ 21365108 (-) False gas2l3
XM_039792073.1 mRNA downstream 289042 21335537 ~ 21353473 (-) True gas2l3
XM_039791971.1 mRNA upstream 41442 21684210 ~ 21753271 (-) False LOC120553490
XM_039791970.1 mRNA upstream 41442 21684210 ~ 21753271 (-) True LOC120553490
XM_039791972.1 mRNA upstream 41442 21684210 ~ 21753269 (-) False LOC120553490
XM_039791973.1 mRNA upstream 41442 21684210 ~ 21732791 (-) False LOC120553490
XM_039791171.1 mRNA upstream 161650 21804418 ~ 21811081 (-) True LOC120553090
XR_005638087.1 other downstream 496982 21063691 ~ 21145533 (-) False ptprz1b
TU310933 other downstream 684295 20957657 ~ 20958220 (-) True G229199
TU310704 other downstream 1520176 20067036 ~ 20122339 (-) False rerg
TU310602 other downstream 1803213 19811245 ~ 19839302 (-) False etv6
TU311312 other upstream 128320 21771088 ~ 21811031 (-) False LOC120553090
TU311319 other upstream 128368 21771136 ~ 21811097 (-) False LOC120553090
TU311637 other upstream 1461992 23104760 ~ 23239573 (-) True G229716
TU311825 other upstream 2049253 23692021 ~ 23711795 (-) True LOC120553170
TU311851 other upstream 2056929 23699697 ~ 23700198 (-) True G229907

Expression Profile