RNA id: TU311375



Basic Information


Item Value
RNA id TU311375
length 434
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G229527
representative True

Chromosome Information


Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 21854383 ~ 21856289 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GTTATTTCTCCAAGTTGGAGGACGGCTCGCTTTGAAGAATATGAGTTTGTAGCTCATTGTTTACCTTACTACGGTGATGCCATCCGTGGTGCCTATTAGGGCATCGACCAGAATGGCTACGGCTTCAGCACCACCGATCGCGACAATGACGGCTGCTCCCCGTGCATCTTTGGTGACATCGCTGAAACGAAATGTGCCAATTCAGACGGCGGCGGTTGGTGGTACAGCCGCTGTGGCTCTGCCAGTCTGAACGGCGACTGGCATCCTGCAGGTGATCACATCGGCTGGGCGTCAGGCCTCTACTGGCATACCTGGAAGAATCCTGCGCCTTACTCCTTGAAGGCCACCAGAATGATGATCAAGTCTGTCTGAGAGGAGCCACATTACTAGCTTTTGTTGTAACACAGCATTACATTTTAGCCATTTCAAAAATG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005638095.1 lncRNA downstream 76707 21777033 ~ 21777676 (-) True LOC120553093
TU311216 lncRNA downstream 171844 21681560 ~ 21682539 (-) True G229413
TU311214 lncRNA downstream 171917 21681613 ~ 21682466 (-) False G229413
TU311187 lncRNA downstream 198221 21655902 ~ 21656162 (-) True G229392
TU311185 lncRNA downstream 211615 21642515 ~ 21642768 (-) True G229390
TU311391 lncRNA upstream 21983 21878272 ~ 21878705 (-) True G229539
TU311393 lncRNA upstream 23615 21879904 ~ 21880220 (-) True G229541
TU311400 lncRNA upstream 56116 21912405 ~ 21947444 (-) False G229546
TU311398 lncRNA upstream 89630 21945919 ~ 21947444 (-) False G229546
TU311399 lncRNA upstream 89630 21945919 ~ 21947509 (-) True G229546
XM_039791165.1 mRNA downstream 17787 21829811 ~ 21836596 (-) False selenoo2
XM_039791163.1 mRNA downstream 17789 21829011 ~ 21836594 (-) True selenoo2
XM_039791162.1 mRNA downstream 26449 21816182 ~ 21827934 (-) False LOC120553085
XM_039791161.1 mRNA downstream 26449 21816182 ~ 21827934 (-) True LOC120553085
XM_039791171.1 mRNA downstream 43302 21804418 ~ 21811081 (-) True LOC120553090
XM_039792520.1 mRNA upstream 34321 21890610 ~ 21894722 (-) True apex1
XM_039792521.1 mRNA upstream 71950 21928239 ~ 21935396 (-) True si:ch211-214j24.10
XM_039792518.1 mRNA upstream 81049 21937338 ~ 21945575 (-) True LOC120553803
XM_039791195.1 mRNA upstream 92447 21948736 ~ 22179107 (-) True nav3
XM_039791196.1 mRNA upstream 92447 21948736 ~ 22179107 (-) False nav3
TU311319 other downstream 43286 21771136 ~ 21811097 (-) False LOC120553090
TU311312 other downstream 43352 21771088 ~ 21811031 (-) False LOC120553090
XR_005638087.1 other downstream 708850 21063691 ~ 21145533 (-) False ptprz1b
TU310933 other downstream 896163 20957657 ~ 20958220 (-) True G229199
TU310704 other downstream 1732044 20067036 ~ 20122339 (-) False rerg
TU311637 other upstream 1248471 23104760 ~ 23239573 (-) True G229716
TU311825 other upstream 1835732 23692021 ~ 23711795 (-) True LOC120553170
TU311851 other upstream 1843408 23699697 ~ 23700198 (-) True G229907
TU311926 other upstream 2052267 23908556 ~ 23914692 (-) True G229950
TU311924 other upstream 2055812 23912101 ~ 23914692 (-) False G229950

Expression Profile