RNA id: XM_039791122.1


Basic Information

Item Value
RNA id XM_039791122.1
length 557
RNA type mRNA
GC content 0.51
exon number 4
gene id ndufa12
representative True

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 7213396 ~ 7216409 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTAACGCACAACAGTCCGTCTCGGTAATTCTTCCGTCGCAAGATGGCGGAGTATGCGAACCTCGTCCGAAGGGCTTTGGGGCAAATAGGAGGTCATGGTGGAGTCCGAGGTTTTCTAACTCAGTTTTTCAGGGTGAATGATGTGAAGACAGGAGCCCTGGTTGGCGTGGATAAATATGGAAACAAATACTATGAGGACAGCAAGCACTACTTCTTTGgacgTCACCGCTGGGTGATCTACACCACAGAGATGAACGGAAAGAACACCATGTGGGAGGTGGACGGCAGCATGGTTCCAGCTGAATGGCATCGTTGGCTGCACTGTATGACCGACGACCCTCCCACCACACACCCACCAGAGCCAAAGAAGTTCCTGGCTGAGGTCCACCAGTTCAACGTGAGTGGCAGCTCACAGCAGTACGTGCCCTACTCCACCACCCGCAAGAAGATCCACGAGTGGGTTCCACCCAAAGCTGGAGCTCAGTGAACTGCTTTACTGCgtatttgtaaattatggtATCCTGCCAACATGTCCTAAATAAAATCTCTAAACAGACA

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016020 membrane cellular_component
GO:0008137 NADH dehydrogenase (ubiquinone) activity molecular_function
GO:0009055 electron transfer activity molecular_function

KEGG:

id description
K11352 NDUFA12; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU306902 lncRNA downstream 106189 7101938 ~ 7107207 (-) True G226273
XR_005638183.1 lncRNA downstream 106197 7105737 ~ 7107199 (-) True LOC120553544
XR_005638184.1 lncRNA downstream 107694 7102512 ~ 7105702 (-) True LOC120553545
TU306878 lncRNA downstream 127427 7073928 ~ 7085969 (-) True tmem243b
TU306881 lncRNA downstream 137690 7073893 ~ 7075706 (-) False tmem243b
TU306994 lncRNA upstream 52698 7269107 ~ 7269723 (-) False usp44
TU306995 lncRNA upstream 53445 7269854 ~ 7270423 (-) False usp44
TU307055 lncRNA upstream 103121 7319530 ~ 7321195 (-) True G226384
TU307096 lncRNA upstream 293505 7509914 ~ 7512464 (-) True G226417
XR_005638122.1 lncRNA upstream 309524 7525933 ~ 7556767 (-) True LOC120553157
XM_039791826.1 mRNA downstream 5197 7163006 ~ 7208199 (-) True tmcc3
XM_039791827.1 mRNA downstream 18428 7163006 ~ 7194968 (-) False tmcc3
XM_039792296.1 mRNA downstream 52609 7153800 ~ 7160787 (-) True eri1
XM_039792297.1 mRNA downstream 52611 7153800 ~ 7160785 (-) False eri1
XM_039792273.1 mRNA downstream 124228 7086944 ~ 7089168 (-) True meig1
XM_039791416.1 mRNA upstream 1391 7217800 ~ 7240443 (-) True LOC120553227
XM_039791417.1 mRNA upstream 1391 7217800 ~ 7239906 (-) False LOC120553227
XM_039791415.1 mRNA upstream 1391 7217800 ~ 7239906 (-) False LOC120553227
XM_039791598.1 mRNA upstream 52628 7269037 ~ 7278324 (-) True usp44
XM_039791975.1 mRNA upstream 69621 7286030 ~ 7313684 (-) True ntn4
TU306891 other downstream 124329 7086947 ~ 7089067 (-) False meig1
TU306880 other downstream 127427 7075900 ~ 7085969 (-) False tmem243b
TU306782 other downstream 482614 6730307 ~ 6730782 (-) True G226200
TU306577 other downstream 1962680 5242890 ~ 5250716 (-) False LOC120553807
TU306354 other downstream 2673618 4531616 ~ 4539778 (-) False LOC120553649
XR_005638120.1 other upstream 210191 7426600 ~ 7494307 (-) False LOC120553151
XR_005638119.1 other upstream 210191 7426600 ~ 7494307 (-) True LOC120553151
XR_005638121.1 other upstream 210191 7426600 ~ 7494303 (-) False LOC120553151
TU307188 other upstream 672162 7888571 ~ 7891311 (-) True G226495
XR_005638147.1 other upstream 1348833 8565242 ~ 8793910 (-) False ppfia2

Expression Profile