Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00072946 |
| length | 739 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 9 |
| gene id | XLOC_037061 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007120.7 |
| NCBI id | CM002893.2 |
| chromosome length | 56459846 |
| location | 19623363 ~ 19653458 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0009443 | pyridoxal 5'-phosphate salvage | biological_process |
| GO:0005829 | cytosol | cellular_component |
| GO:0008478 | pyridoxal kinase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-8376 | Predicted to enable pyridoxal kinase activity. Predicted to be involved in pyridoxal 5'-phosphate salvage. Predicted to be active in cytosol. Is expressed in pronephros and ventricular zone. Orthologous to human PDXK (pyridoxal kinase). |
| ensembl_id | ENSDART00000142471 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00074892 | lncRNA | upstream | 112436 | 19489514 ~ 19510927 (+) | False | XLOC_037058 |
| TCONS_00072942 | lncRNA | upstream | 118666 | 19504363 ~ 19504697 (+) | True | XLOC_037058 |
| TCONS_00072937 | lncRNA | upstream | 131598 | 19489537 ~ 19491765 (+) | False | XLOC_037058 |
| TCONS_00072941 | lncRNA | upstream | 131598 | 19489998 ~ 19491765 (+) | False | XLOC_037058 |
| TCONS_00072932 | lncRNA | upstream | 150023 | 19466365 ~ 19473340 (+) | True | XLOC_037057 |
| TCONS_00074893 | lncRNA | downstream | 148596 | 19795154 ~ 19797107 (+) | False | XLOC_037062 |
| TCONS_00075082 | lncRNA | downstream | 148596 | 19795154 ~ 20053449 (+) | False | XLOC_037062 |
| TCONS_00075083 | lncRNA | downstream | 148597 | 19795155 ~ 20053449 (+) | False | XLOC_037062 |
| TCONS_00075084 | lncRNA | downstream | 148608 | 19795166 ~ 19797107 (+) | False | XLOC_037062 |
| TCONS_00075085 | lncRNA | downstream | 151693 | 19798251 ~ 19810178 (+) | False | XLOC_037063 |
| TCONS_00072945 | mRNA | upstream | 73305 | 19529951 ~ 19550058 (+) | True | XLOC_037060 |
| TCONS_00072944 | mRNA | upstream | 95325 | 19518674 ~ 19528038 (+) | False | XLOC_037059 |
| TCONS_00072943 | mRNA | upstream | 95325 | 19518674 ~ 19528038 (+) | True | XLOC_037059 |
| TCONS_00072939 | mRNA | upstream | 118666 | 19489561 ~ 19504697 (+) | False | XLOC_037058 |
| TCONS_00072940 | mRNA | upstream | 118666 | 19489600 ~ 19504697 (+) | False | XLOC_037058 |
| TCONS_00072954 | mRNA | downstream | 837288 | 20483846 ~ 20502622 (+) | False | XLOC_037068 |
| TCONS_00072955 | mRNA | downstream | 837293 | 20483851 ~ 20501710 (+) | True | XLOC_037068 |
| TCONS_00072956 | mRNA | downstream | 873288 | 20519846 ~ 20524673 (+) | False | XLOC_037069 |
| TCONS_00072957 | mRNA | downstream | 873311 | 20519869 ~ 20523292 (+) | True | XLOC_037069 |
| TCONS_00072958 | mRNA | downstream | 879914 | 20526472 ~ 20539280 (+) | False | XLOC_037070 |
| TCONS_00072913 | other | upstream | 1015094 | 18605564 ~ 18608269 (+) | False | XLOC_037047 |
| TCONS_00072912 | other | upstream | 1015370 | 18605460 ~ 18607993 (+) | False | XLOC_037047 |
| TCONS_00072915 | other | upstream | 1015375 | 18606737 ~ 18607988 (+) | True | XLOC_037047 |
| TCONS_00072914 | other | upstream | 1015558 | 18605571 ~ 18607805 (+) | False | XLOC_037047 |
| TCONS_00072909 | other | upstream | 1272880 | 18350367 ~ 18350483 (+) | True | XLOC_037045 |
| TCONS_00072949 | other | downstream | 174899 | 19821457 ~ 19823614 (+) | False | XLOC_037064 |
| TCONS_00072951 | other | downstream | 190825 | 19837383 ~ 19841055 (+) | True | XLOC_037065 |
| TCONS_00072952 | other | downstream | 740187 | 20386745 ~ 20392034 (+) | True | XLOC_037066 |
| TCONS_00072953 | other | downstream | 787254 | 20433812 ~ 20436515 (+) | True | XLOC_037067 |
| TCONS_00072967 | other | downstream | 1211162 | 20857720 ~ 20859493 (+) | False | XLOC_037073 |
