Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039791468.1 |
| length | 1105 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 4 |
| gene id | ccdc59 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053134.1 |
| NCBI id | CM020931.1 |
| chromosome length | 29109922 |
| location | 11849064 ~ 11852957 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU308429 | lncRNA | downstream | 17387 | 11831029 ~ 11831677 (-) | True | G227384 |
| TU308338 | lncRNA | downstream | 26360 | 11812483 ~ 11822704 (-) | True | G227314 |
| TU308317 | lncRNA | downstream | 348150 | 11498844 ~ 11500914 (-) | True | G227295 |
| TU308286 | lncRNA | downstream | 389041 | 11458797 ~ 11460023 (-) | False | hgfa |
| TU308245 | lncRNA | downstream | 581275 | 11267586 ~ 11267789 (-) | True | G227248 |
| XR_005638138.1 | lncRNA | upstream | 43341 | 11895643 ~ 11906818 (-) | True | LOC120553249 |
| TU308452 | lncRNA | upstream | 43344 | 11895646 ~ 11906820 (-) | False | LOC120553249 |
| TU308456 | lncRNA | upstream | 43344 | 11895646 ~ 11906820 (-) | False | LOC120553249 |
| TU308458 | lncRNA | upstream | 53946 | 11906248 ~ 11906820 (-) | False | LOC120553249 |
| XR_005638139.1 | lncRNA | upstream | 92028 | 11944330 ~ 11949201 (-) | True | LOC120553250 |
| XM_039791451.1 | mRNA | downstream | 123 | 11837248 ~ 11848941 (-) | False | cracr2ab |
| XM_039791452.1 | mRNA | downstream | 123 | 11837248 ~ 11848941 (-) | False | cracr2ab |
| XM_039791450.1 | mRNA | downstream | 123 | 11837248 ~ 11848941 (-) | True | cracr2ab |
| XM_039791453.1 | mRNA | downstream | 123 | 11838441 ~ 11848941 (-) | False | cracr2ab |
| XM_039792254.1 | mRNA | downstream | 41397 | 11789195 ~ 11807667 (-) | False | tspan11 |
| XM_039791465.1 | mRNA | upstream | 81826 | 11934128 ~ 11936367 (-) | True | LOC120553247 |
| XM_039791463.1 | mRNA | upstream | 84112 | 11936414 ~ 11943239 (-) | False | LOC120553245 |
| XM_039791462.1 | mRNA | upstream | 84112 | 11936414 ~ 11943172 (-) | False | LOC120553245 |
| XM_039791460.1 | mRNA | upstream | 84112 | 11936414 ~ 11941340 (-) | False | LOC120553245 |
| XM_039791461.1 | mRNA | upstream | 84112 | 11936414 ~ 11941339 (-) | True | LOC120553245 |
| XR_005638137.1 | other | downstream | 123 | 11838944 ~ 11848941 (-) | False | cracr2ab |
| XR_005638189.1 | other | downstream | 172232 | 11624009 ~ 11676832 (-) | False | pcloa |
| TU308180 | other | downstream | 867805 | 10980198 ~ 10981259 (-) | True | G227197 |
| TU308019 | other | downstream | 1326102 | 10513494 ~ 10522962 (-) | True | G227082 |
| unassigned_transcript_1485 | other | downstream | 1652631 | 10196347 ~ 10196433 (-) | True | trnay-gua_61 |
| TU308500 | other | upstream | 432624 | 12284926 ~ 12288154 (-) | True | G227429 |
| TU308872 | other | upstream | 1667963 | 13520265 ~ 13529778 (-) | False | LOC120553470 |
| TU308919 | other | upstream | 1799360 | 13651662 ~ 13659272 (-) | True | LOC120553486 |
| unassigned_transcript_1491 | other | upstream | 1957305 | 13809607 ~ 13809679 (-) | True | trnak-cuu_13 |
| TU309376 | other | upstream | 3207701 | 15060003 ~ 15061429 (-) | False | znf800b |
