Item | Value |
---|---|
RNA id | XM_039791875.1 |
length | 1341 |
RNA type | mRNA |
GC content | 0.52 |
exon number | 8 |
gene id | LOC120553465 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_053134.1 |
NCBI id | CM020931.1 |
chromosome length | 29109922 |
location | 24365338 ~ 24375224 (-) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
species | eurasian perch (Perca fluviatilis) |
id | name | namespace |
---|---|---|
GO:0006355 | regulation of transcription, DNA-templated | biological_process |
GO:0005634 | nucleus | cellular_component |
GO:0043565 | sequence-specific DNA binding | molecular_function |
GO:0046982 | protein heterodimerization activity | molecular_function |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU312090 | lncRNA | downstream | 49481 | 24315083 ~ 24315857 (-) | True | G230089 |
TU312050 | lncRNA | downstream | 139927 | 24204030 ~ 24225411 (-) | True | G230067 |
XR_005638165.1 | lncRNA | downstream | 163213 | 24117732 ~ 24202125 (-) | True | LOC120553435 |
TU311966 | lncRNA | downstream | 284185 | 24080527 ~ 24081153 (-) | True | G229987 |
TU311929 | lncRNA | downstream | 416558 | 23946497 ~ 23948780 (-) | True | G229952 |
TU312120 | lncRNA | upstream | 103870 | 24479094 ~ 24479656 (-) | True | G230118 |
TU312121 | lncRNA | upstream | 104483 | 24479707 ~ 24481679 (-) | True | G230119 |
TU312122 | lncRNA | upstream | 106463 | 24481687 ~ 24482539 (-) | True | G230120 |
TU312123 | lncRNA | upstream | 107391 | 24482615 ~ 24485522 (-) | True | G230121 |
TU312188 | lncRNA | upstream | 194078 | 24569302 ~ 24571318 (-) | True | G230165 |
XM_039791667.1 | mRNA | downstream | 80629 | 24256783 ~ 24284709 (-) | True | podxl |
XM_039792024.1 | mRNA | downstream | 255765 | 24066409 ~ 24109573 (-) | True | net1 |
XM_039791522.1 | mRNA | upstream | 133552 | 24508776 ~ 24565806 (-) | True | slc41a2b |
XM_039791521.1 | mRNA | upstream | 133552 | 24508776 ~ 24565805 (-) | False | slc41a2b |
XM_039791854.1 | mRNA | upstream | 416268 | 24791492 ~ 24797223 (-) | True | LOC120553455 |
XM_039791858.1 | mRNA | upstream | 422171 | 24797395 ~ 24826222 (-) | False | aldh1l2 |
XM_039791859.1 | mRNA | upstream | 422171 | 24797395 ~ 24823837 (-) | True | aldh1l2 |
TU311926 | other | downstream | 450646 | 23908556 ~ 23914692 (-) | True | G229950 |
TU311924 | other | downstream | 450646 | 23912101 ~ 23914692 (-) | False | G229950 |
TU311825 | other | downstream | 653543 | 23692021 ~ 23711795 (-) | True | LOC120553170 |
TU311851 | other | downstream | 665140 | 23699697 ~ 23700198 (-) | True | G229907 |
TU311637 | other | downstream | 1125765 | 23104760 ~ 23239573 (-) | True | G229716 |
unassigned_transcript_1528 | other | upstream | 201726 | 24576950 ~ 24577021 (-) | True | trnap-agg_20 |
XR_005638196.1 | other | upstream | 816559 | 25191783 ~ 25217693 (-) | False | sult4a1 |
TU312561 | other | upstream | 1220356 | 25595580 ~ 25601366 (-) | False | LOC120553115 |
TU312668 | other | upstream | 1805327 | 26180551 ~ 26196487 (-) | False | mkrn1 |
TU312734 | other | upstream | 2000468 | 26375692 ~ 26381365 (-) | True | G230594 |