RNA id: XM_039791942.1


Basic Information

Item Value
RNA id XM_039791942.1
length 3579
RNA type mRNA
GC content 0.43
exon number 8
gene id adipor2
representative True

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 13902858 ~ 13939279 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GCTGAGTCCAGTTTGGTCTAGCGACAGTCAGTAACCGTTCAATAGTATAGAGAAGCAGAGCAGCGACTACAACTCCATTAACTGTGTTACGTTACCCAGATGACGGATTCATATTCAGACATCAGGGCCAGTTCTGAGTGAAGATCCAAAGACTGGATTTAGTCATCTTCATCTATTAAATCTTCTGTCTGTGGAGGCCAGTCCAGCGTTTCAAGCTGGACAGAGGAGAGACGAGTGGGGCCGAGGGCCCAGCCTTCGTGCTGCGACACAGAACTTCAAACCTCATTGAACATGCAACAGATAGCACGCCTACAGATCCCATGAGTCCCCGGGAGAGAGCAGACACGCCCATCTCAGGTTCTCCAAGCACCGCACAGTGCCCCTCACACAATGCGAGGGTCCCAGAGTGCGatgaggagagaagaaaaaatgaAGAGAAGGACGAAgtaagagaaggaaaggagaaagaagaagaggatgaGAGGAGCAGTGATGAAGGTTTCATGGGAATGACTCCGCTGCTGCAGGCTCACCATGCCATGGAGAGAATGGAGGAGTTTGTACACAAGGTGTGGGAGGGCCGGTGGCGCGTCATACCTCACGACGTGCTCCCCGATTGGCTGAAGGACAATGACTTTCTGCTCCATGGGCACAGGCCACCCATGCCTTCGTTCCGCGCCTGCTTCAAGAGCATCTTCAGAATCCATACAGAAACGGGAAACATCTGGACACATCTGCTAGgctgtttgtttttcctctgtTTGGGTCTGATGTTCATGTTCAGGCCCAACATGTCGTTCGTGGCTCCAGTCCAGGAGAAGGTGGTGATCGGGATGTTTTTCCTGGGAGCTGTCCTCTGCCTCTCCTTTTCCTGGCTCTTCCACACAGTCTACTGCCACTCTGAGGGCGTCTCCAGAGTCTTCTCCAAGTTGGACTACAGTGGGATCGCTTTCCTGATCATGGGCTCGTTTGTCCCCTGGTTATACTACTCCTTCTACTGCTCCCCTCAGCCCCGCTTCATCTACCTGATAGTGGTGTGCATACTGGGATTGGCCGCCATCACCGTTTCCCAGTGTGACTTCTTCGCCACACCGCAGTACAGAGGAGTCAGAGCAGGAGTGTTTGTGGGTCTGGGTCTGAGCGGCGTGGTTCCTACCCTGCACTTTGTCATCAGCGAGGGTCTGATTAAAGCGACCACAATGGGTCAGATGGGTTGGCTGCTGCTCATGGCGACGCTCTACATCACTGGAGCCTGTCTGTACGCCGCTCGCATCCCTGAGAGGTTCTTCCCTGGCAAGTGTGACATCTGGTTCCACTCCCACCAGCTGTTCCACATCTTGGTGGTCGCAGGAGCCTGCGTTCATTTCCACGGTGTCTCCAATCTGCAGGAGTTTCGCCTCAAGGCAGGAGGGGGCTGCACCGCGGACGGCACCCtctaacgcacacacacactgactcagTCATTTACTCACACACAATTTATGGGGAGGCACTGTTTTGAATAATGTGCACAGagttacacaaacaaacacacacacaaaacctaagacatgcacacacgctcTCCCACTAAACTGAAGACCGACGTGGCTtgtctggtgtgtgtctgtgtgcgtaatACACAGAATGGCCTCTCTAAAACTGACTGACAGGGGTTtttgttctctttctgtccctctgtctgtctatctgtccaCCCCCACCTCTTCTGGCTCTGTTGCTTCGATTATAAAACAAGATGTGTGTTTTATAAACCCGTTTTTGAGACTCTTTCCAGAAAGTATCTCTGTTTGTTTGGGAGGGAGGTGAGGCATTCAAAACCTCCCTTCAATCATGCTACATTTTCTTCTGTGTTGAGTTCTGACTGTTTAATGGTTGAATTTGAAAAGGAAGCATAAttgtggctttaaaaaaaatacattttgtggtgtgttttttttgctaaatgCTGTTTTCTAATTCACACTTTAGAGCATTGaaatatgaaaaaagaaaaataactgaGTGGATTTCTTTCATGATTGTGAAGGTTGCAGGGAGATGTTGGGAATTGGGGTGGGCAGTcacttttaaaagtaaaaaaaaaagaaaaccttttCCATGTAAATAAGATTTCTAAATTTGGGGTTATAGATTtctatgaaatatatatatgaaaaaagaaaaaaatgttatgACATGATGGCAAGAAGAAATAAATATGTTAGATGATGAAGGAGAGGTCTTATATACACTTTCTCTAGCAGTGAGGTGCAATGGTGAGAATAATACAATAATTCTGTGGTTGGAGGGAATCGCTTCAAACAACTTCATGTAGTGTGTATATGCGATGATGACAGGTGGAAGCAAGGAGGAAATATACAACACAACATTTGAATCTTATCAAACAAATGGCGACTTCAAAACTCGCTGGTATTTTTGCCTTCAGTGCAGGTGGGAAGTGACAACTCAGAGTCACTTTTCTGATCTAAAAACCTTGAAATATAAACGAGGAGACAGCAGAACAACGGTTCTCTACTCAGTTTTGTTCCACTTTTGTGTTGACCCTGCGCCCTTGTGTTTGTCACAGACCTGGTGCACAGATCTCAAATCAGGCCTCACGAAAAAAAAGTTCTCATGTGAACATTTGTGCTTAAAAACCAAATCTAAAGTCAAAACTATGATATATAAAAGAGTCCTCTTGATATGTAGCCATTTTCATTCATctttttactgtaaattatCTGATATGTCTGAATATAAAACCAATTTCCTTGTCACCAATATAAGTTTATTCTTTTCTATGACATGCCCTTACATGATTTGttaaaaatcatatttttttttacacaaggaTAACttgaagatatttttttaataaacaaggCCCcagagtcatatatatataattttggtCAAACTGCAGTATTATTACAGTACAGATGCAGTTCATTGTAGTCCTCCTCCTTTGGCTACTCtgtctgaaaacatgtttttctttttgattgGATTGCATTTCACTTTATCCACTGCTGGTTTTGGTATTATTATTGCGagctttaatttctttttttcttttctattatttatcACTGGTTTCTCTTATTTATCCAGAGATCATGTGATGTTAGGAAAGAGGCCCTGAGTACCATGTCTGTCTTGTCCTAGCAAATAAAGAAGTATCCTGTAAAGATATGATAAAGTTAACTACATTAAGGACACATGACCTGCCTCCGATATGGAGACTTTACTTGGAGATTAAAACAAAAGGGGAACTTTCTGGCAATACCAAAATCTCGCTCCACAACGGAAACACTTAAATTGTGAGCTTATCATAAACTGTATGTCTATGATTGTTTGAAATTTAAGTTTGCAAGTTTCTATTTGATGGCAGCTTTTTCTGAACAAGATTTTGAACACAATTTCTCAGTTTTTCTTCattctctgtttttatttgatgtagtttatattaatttatttcTCTTGGGGAGCAAATATTGTCTGTTGAAGCACACGTTCTGTTCTGATGGGAGTGTTTGATTGCAATAGACCTTTATATCTGCTGTATTGTTCtaataaaaaggtttttttccGAATCTG

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K07297 ADIPOR; adiponectin receptor

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU308840 lncRNA upstream 348032 13554250 ~ 13554826 (+) True G227662
TU308823 lncRNA upstream 371311 13516482 ~ 13531547 (+) True G227646
TU308813 lncRNA upstream 408997 13493401 ~ 13493861 (+) True G227639
TU308615 lncRNA upstream 827510 13071545 ~ 13075348 (+) True G227510
TU308594 lncRNA upstream 859840 12987713 ~ 13043018 (+) True G227499
TU308978 lncRNA downstream 17418 13956697 ~ 13965492 (+) True G227734
TU308980 lncRNA downstream 28264 13967543 ~ 13969687 (+) True G227736
TU308995 lncRNA downstream 76819 14016098 ~ 14054224 (+) False G227743
TU308986 lncRNA downstream 93116 14032395 ~ 14046985 (+) True G227742
TU308988 lncRNA downstream 111140 14050419 ~ 14054224 (+) True G227743
XM_039791937.1 mRNA upstream 7857 13802193 ~ 13895001 (+) True wnt5b
XM_039791936.1 mRNA upstream 7857 13802193 ~ 13895001 (+) False wnt5b
XM_039791938.1 mRNA upstream 7857 13802193 ~ 13895001 (+) False wnt5b
XM_039791940.1 mRNA upstream 7857 13802193 ~ 13895001 (+) False wnt5b
XM_039791941.1 mRNA upstream 7857 13881031 ~ 13895001 (+) False wnt5b
XM_039791946.1 mRNA downstream 62853 14002132 ~ 14004905 (+) True LOC120553485
XM_039791948.1 mRNA downstream 62853 14002132 ~ 14004905 (+) False LOC120553485
XM_039791909.1 mRNA downstream 197912 14137191 ~ 14144663 (+) False LOC120553474
XM_039791912.1 mRNA downstream 197912 14137191 ~ 14144663 (+) False LOC120553474
XM_039791908.1 mRNA downstream 197914 14137193 ~ 14144663 (+) True LOC120553474
unassigned_transcript_1494 other upstream 67857 13834929 ~ 13835001 (+) True trnak-cuu_14
unassigned_transcript_1493 other upstream 68527 13834221 ~ 13834331 (+) True trnal-caa_24
unassigned_transcript_1492 other upstream 69709 13833039 ~ 13833149 (+) True trnal-caa_23
unassigned_transcript_1490 other upstream 100655 13802093 ~ 13802203 (+) True trnal-caa_22
unassigned_transcript_1489 other upstream 101098 13801648 ~ 13801760 (+) True trnal-caa_21
TU309000 other downstream 63084 14002363 ~ 14004893 (+) False LOC120553485
TU309001 other downstream 63084 14002363 ~ 14004849 (+) False LOC120553485
XR_005638140.1 other downstream 1229325 15168604 ~ 15197830 (+) False LOC120553256
XR_005638118.1 other downstream 2831779 16771058 ~ 16831243 (+) False cald1a
XR_005638117.1 other downstream 2831783 16771062 ~ 16831243 (+) False cald1a

Expression Profile