RNA id: XM_039792098.1


Basic Information

Item Value
RNA id XM_039792098.1
length 4453
RNA type mRNA
GC content 0.52
exon number 24
gene id pik3cg
representative True

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 21022335 ~ 21046386 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTGACAACCTTCCTGAGTTGAACCGCAGCGACTTTGCCTACGAACTATTTTGACTCTGGTTTTAGGTCTCTTCATATAGCATAAATGCCGAAACTTTTGAAAAAAGCTCCAGGTTTCGTTGCCGCCTGCGTCTGCGTTCGTTGctAGGCGATGGACGGGCAGCAGATCCCGGTGAGCGACCAAGAACCCAAAGCCCTGCGAGAAGACacgcggaggaggaggagaaagaaggcCATCATGTCGTCGTCCTGCACCTCCATGGATCAGATCAGCGTTGAGTTCGTCCTGCCCACCTCGGCGCGGGGCGGAAACAGCCCCGACACCCTGCAGCTGGAGGTGGCTGGAAACACCCTGTTGTTTCTTGTCTCGCAGGTGAAAGCCCAGGTGTGGCTGAAGGCGGTGACTTTAAACCTCTGTCCTGACTTCTACCAGCGCTTCTCCCCCGACCACTGCATCCTGCTCTACCAGAAGAAAGGCAACGTGTGCGAGATCTACGACAAGCACCAGGTGTTCCAGACGCTGGACTGCATCTGTTACTGGAGAGccCTGAAGAAAGACGTGGGGCGGATCCAGCTGGTTCCCCGTCCGCAGCCCTCGGACGAGTCCCAGCAGTACCAGCGCTACCTCAACTACCTGATCGGCTACGACGTGACCGATGTCAGCAACGTGCACGACGACGAGCTGGAGTTCACCCGCAGGAAGCTGCTGACGCCGCGACGCATCCAGCTGGCTGACCGCGACGCAAAACTCTACTCCATGGACCCCTGGGTCACCCGCAAGCCGCTGCCTGAGCACCTGCTcagcaagATCAGTAACGGTCACATCCTGGTGGTGATCCACATCGGCACGGCCAGCCAGACCATCAAGGTCTCCATCGACAACACGCCAGCACAGGTATTGGTGAGCTTTCTCGCCAAGACCGCAAATAAGAGAAGTTTGCTGGGCATTCCTGACAACATGTGCGAGGCCGACTTTGTGCTACGTGTGTGTGGAAGGGAGGAGTACCTGTACGGGGATAAACCGCTGCAGGACTTCAACTGGATCCGTCAGTGTCTGAAGAACGGGGAGGAAATCCACCTGGTTCTAGAGGCGCCACCTGATACAGACCTGGATCTGGTTCAGAAGGAGGACTGGGCACAAGTGGACGACTGCACCGGAGTCGCAGGTACCCATGAGCAGTTGACCATCGATGAGAAGGACCATGAACGAGTGTTCACCATCTCCATGTGGGACTGTAACAGGAAGTTCCGAGTGAAGGTGCTGGGTATTGACATCCCATCTCTCCCCAAAATCCCAGAGTTTATTGTCTTCGTAGAAGCCAGCATCTTCCACGGCCAGCAGCTTTTAGCCCAGGAGAGGACGTCCTCTAAAACCTTCAATGAAGAAGTGCTGTGGAACTGCTGGTTGGAGTTTAACATTAAGATCAAGGACCTGCCTAAAGGAGCACGACTCAACCTCCAGGTGGTCTGCGGGAAGCAGTCCCAGACGCCAAACTCCAAGGGATCCTCCGCCTACCAGGATAATACAGCGGGAACAGGCAGTCACGATGGAAAGATCAAGAGCCGTCTTCTGTACTACGTCAACCTGCTGCTGATCGACCACCGCTCCCTGCTGCGCCAGGGCGAGTTCATCCTCCACATGTGGAAAATGCCCGAGAAGAGCgaggagagcagcagcagcatcaacgCAGACAAGCTCACCTCGGCCACCAACCCCGACAAGGCCTCGGCCATGGCCGTCGCCATCCTGCTGGACAAGTATTGCTACCCCGTGGTGCTGCCCAAGAGTCGGGACGTGGGCCGGGACGCCGCCGCTGCTGCCGCCGCCGCCGGCTGCGAGGAGGCCGAGGCAGGGGAGCGCGGTCAGAGAGAGATGCCCAACCACCTGAAGAAACAGTTTGCGGCGATCGTGGCCACAGACCCCCTGCATCCGCTCAGCCCTGAAGACAAAGAGCTGCTGTGGCACTTCAGGCATGAGTGTATGCGCGACCCCAGGGCTTACCCAAAGCTCCTGAGTTCAGTCAGGTGGGGGAAACAGGAAGATGTTTTGGCAACACACCGTCTGTTGGAGCGCAGCAGCGCGTGGGACAGCAGTggtctggatgtgggtctggccaTGCAGCTGCTGGACTGCCACTACTCGGATGCTCAGGTTCGCTCGATGGCCGTCAGGAAGCTGGAGACTCTGGAAGATGACGATGTGCTCCGATACCTTCTGCAGCTCGTGCAGgCGGTCAAGTTTGAGCCCTACCATGACAGTGCCCTGGTCAGGTTCCTGCTGAAGACAGCTCTGAGGAGTAAGCGTATCGGCCATTTTCTCTTCTGGTTCCTGCGCAGTGAGATCGCTCAGTCCATGCATTACCAGCAGAGGTATGCCGTCCTGCTGGAGGCCTACCTCAGAGGCTGTGGTGAGGACATGCTGCAGGACTTcaggaaacagGTGGAGATGACGGAGGCTCTGCAGAAAGTCACCCGTGAGGTCAAGGCCATGTCTGCTGACAAGTGCGATATCACAGCACAAGTGGTGTTTCAGTTGCGTCAGAAGCTGGAGACTCTGCAGTCATCCGGTCTGCCGGAGAGTTTCCGAGTCCCTTACGATCCTGGACTAAGAGCCGGAGCCCTGCTGATCGAGCAGTGTAAAGTGATGGCGTCTAAGAAGAAGCCACTGTGGCTGCAGTTTAAAAGGGCCGACCCCACCACTCTGTCCAAAGACCCCATCGGCATCATCTTCAAAGACGGCGACGACCTCAGACAGGATATGCTCATCCTGCAGATTCTGCTGATCATGGAGTCGATCTGGGAGACGGAATCACTGGATCTCTGTCTGTTACCATACGGCTGCATCTCCACTGGAAACAAGATAGGTATGATCGAGACTGTGAAGGACGCCACCACCATCGCTAACATCCAGCAGAGTGTTGTGGGAAGCACCGGAGCTTTTAAAGATGAAATCCTCTGTCAGTGGCTGCGGGACAAGTGTGTCAGCGAGGACAAGtTCCAGCAGGCTGTGGAGAGGTTCCTGTATTCCTGCGGTGGCTACTGTGTGGCTACCTACGTTCTGGGTATTGGGGATCGCCACAATGACAACATCATGATCACCGAATCTGGGAATCTCTTCCACATCGACTTTGGTCACATCCTGGGGAATTACAAGAGTTTCATGGGAATCAGTAAGGAGTGGGTTCCCTTTGTGCTCACACCAGACTTCCTGTATGTCATGGGAACATCGGGAAAGAAAAGTAGCCCCCACTTCCAGAAATTCCAGgatgtgtgtgtgaaggcTTACCTCGCCCTTCGGCACCACACCAACCTGCTCATCATCCTCTTCTCCATGATGCTGATGACCGGCATGCCCCAGCTGACCAGCAAGGAAGACATCGAGTACATCCGCGAGGCGCTGACAGTCGGCCGCAGCGAGGACGAGGCACAGCGCCACCTCCTGGACCAGATAGAGATCTGCAGGGAAAAGGGCTGGATGGTTCAGATCAACTGGTTTGTTCACCTGGTGCTGGGGATCAAGCAGGGTGTGGAGAAACGGTCCACTTAGGACTCTGTATAAATTAGGACAGATTAAGATTTCCTTAacgcatttcttttttttttttacaagaagGTTCCAACAGAAGACTGAAAAGTAATTTTTTAACATCTCAGTATACCTGCAAACACAGATTTTGAATTTTAGACCACGGGTCATCTCAAATATAATAGTCATTTTTATGAAGAATAATGACAGCAGATGAATAATTTAGAAATGGGATATGAAAATCCCATCAAAAGCAATCATTTCAACTATGTAAAAAAAGGCTGGAACTTAAGCCTGCAAGAGtgattttaaccttttttttagaCTTGGCACCGAGATGCATAAGtgctaaatgaaatgtaatgaatTATATTCTATGTTGTGGAGACAGGGAACAGGATATACATCCCTAAGCACTGCTTAGACCAAGTCAAACATCCGCACCTAACTCAATAACATTTATcagagtttttcttttcttttcttcttttgtctcAAATCAACCGTACTATGACTGTCGTTGCGTAAGTCTTTGCCTGCTTAGTTTTACCTCTCGTTTCCACACACTTTCAACTGTTTCTCAGATGAAACAGTTGCTGTTGGCCCAACCACCTCAAACAGTTATTGATAATGATTTTGGTTAAATAAGAAAccttttgaaaaaacaaacaaaccaaaaaagaacttaaaggagaaatccgtcCGATTTTTATCTGACTCTTGATCGCTAGATGTCAccgagtactgtcgataggggaaaaaaaacgaccaaaatcggtgctagcaaactggagttgctgcatcTAATGGCCAGAGCTCTCAGTTAGCTAAAATGCCAGTTGTGGGGGCATGttctaaagagtgcctttgtgcctcttaacagacagaaaattcaattaaaatgtctgtgcaacatgaacagggccct

Function

GO:

id name namespace
GO:0046854 phosphatidylinositol phosphorylation biological_process
GO:0048015 phosphatidylinositol-mediated signaling biological_process
GO:0030593 neutrophil chemotaxis biological_process
GO:0005524 ATP binding molecular_function
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
K21289 PIK3CG; phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU310905 lncRNA downstream 154806 20867300 ~ 20867529 (-) True G229172
XR_005638201.1 lncRNA downstream 167069 20776403 ~ 20855266 (-) True LOC120553789
TU310901 lncRNA downstream 242427 20779683 ~ 20779908 (-) True G229168
TU310900 lncRNA downstream 242965 20779083 ~ 20779370 (-) True G229167
TU310899 lncRNA downstream 319266 20702711 ~ 20703069 (-) True G229166
TU310999 lncRNA upstream 152082 21198468 ~ 21199259 (-) True G229248
TU311069 lncRNA upstream 218115 21264501 ~ 21264812 (-) True G229296
TU311129 lncRNA upstream 404077 21450463 ~ 21453152 (-) True G229351
TU311131 lncRNA upstream 404077 21450463 ~ 21453152 (-) False G229351
TU311122 lncRNA upstream 414690 21461076 ~ 21461460 (-) False slc38a2
XM_039792489.1 mRNA downstream 14100 20925173 ~ 21008235 (-) True ano2b
XM_039792490.1 mRNA downstream 14102 20925173 ~ 21008233 (-) False ano2b
XM_039792491.1 mRNA downstream 30547 20925173 ~ 20991788 (-) False ano2b
XM_039792470.1 mRNA downstream 381613 20620545 ~ 20640722 (-) True il15ra
XM_039792475.1 mRNA downstream 384234 20620545 ~ 20638101 (-) False il15ra
XM_039791070.1 mRNA upstream 17305 21063691 ~ 21145533 (-) False ptprz1b
XM_039791069.1 mRNA upstream 17305 21063691 ~ 21145533 (-) False ptprz1b
XM_039791071.1 mRNA upstream 17305 21063691 ~ 21138485 (-) True ptprz1b
XM_039791073.1 mRNA upstream 106815 21153201 ~ 21183826 (-) True slc13a4
XM_039791074.1 mRNA upstream 107191 21153577 ~ 21183856 (-) False slc13a4
TU310933 other downstream 64115 20957657 ~ 20958220 (-) True G229199
TU310704 other downstream 899996 20067036 ~ 20122339 (-) False rerg
TU310602 other downstream 1183033 19811245 ~ 19839302 (-) False etv6
TU310603 other downstream 1183033 19811245 ~ 19839302 (-) False etv6
TU310604 other downstream 1215237 19733102 ~ 19807098 (-) True G228934
XR_005638087.1 other upstream 17305 21063691 ~ 21145533 (-) False ptprz1b
TU311312 other upstream 724702 21771088 ~ 21811031 (-) False LOC120553090
TU311319 other upstream 724750 21771136 ~ 21811097 (-) False LOC120553090
TU311637 other upstream 2058374 23104760 ~ 23239573 (-) True G229716
TU311825 other upstream 2645635 23692021 ~ 23711795 (-) True LOC120553170

Expression Profile