RNA id: XR_005638196.1


Basic Information

Item Value
RNA id XR_005638196.1
length 1118
RNA type transcript
GC content 0.52
exon number 8
gene id sult4a1
representative False

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 25191261 ~ 25217693 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTGGCTGTAGGTCAACCCATCCGCCTGCCGCGCAGCATCCACAGCAGCACCGTTTCAAATCAACCTCATCACCACCGTCATCCTCACGTTTTGATtgaatacaacaacaacaaccaaaaatCGTTCGCGTGGGTGTGCGCGTTTTCCTTTTTCTTGCACTGGCGGCTCGTTTCGAGGATGGCTGAGAGCGAGGTAGACACGCCAAGCACGCCCATTGAGTTTGACAGCAAATACTTCGAGTTTGATGGAGTGCGGCTGCCACCCTTCTGCAGAGGGAAGATGGAGGAAATCGCCAACTTCTCGCTCAGAAGTAGCGACATATGGATCGTCACCTACCCAAAGTCAGGCACTAGTCTACTTCAGGAGGTGGTGTATCTAGTGAGTCAGGGAGCAGACCCAGATGAGATTGGCCTCATGAACATCGACGAACAGCTGCCCGTCTTAGAGTACCCCCAACCTGGCCTGGACATCATACAGGAGCTGACGTCCCCTCGTCTGATCAAAAGCCATCTCCCCTATCGATTCCTCCCCACGGCCATGCACAACGGAGAGGCCAAGGTGATCTATATGGCTCGTAACCCTAAGGACCTGGTGGTGTCTTACTACCAGTTCCACCGCTCTCTCAGGACCATGAGCTACCGGGGAACCTTCCAGGAGTTCTGCCGGCGCTTCATGCATGACAAGCtgGGATATGGTTCCTGGTTTGAACATGTTCAGGAATTTTGGGAACATCGTAATGACTCTAATGTCCTCTTCTTGAAATATGAAGACATGTACAAGGATCTGGGGCCATTGGTGGAACAGTTAGCCCGGTTCCTGGGTGTTTCCTGTGACAAGGCTCAGCTGGAGGGCATGGTGGAGAGCTGCAACCAGCTCATTGAGCAGTGCTGCAACTCGGAGGCGCTGTCCATCTGCAGGGtgCATGGAAGTCTGGTGTCTGATGTGCTATAGGCTTAACACACAGCTGACAGCTGTCAGTCTGATCCGTCTTACACACGCCACAGCAGGTCGTGCAGGTCTGTGGAAGGATGTCTTCACTGTGTCTATGAATGAAAACTTTGACGCTGTGTACAGACAGAAGATGGGCAAGTCCGACTTGACCTTTGACTTCTGCCTGT

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008146 sulfotransferase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU312337 lncRNA downstream 112057 25079262 ~ 25079726 (-) True G230277
TU312338 lncRNA downstream 112057 25079262 ~ 25079726 (-) False G230277
TU312339 lncRNA downstream 112057 25079262 ~ 25079726 (-) False G230277
TU312265 lncRNA downstream 194154 24938873 ~ 24997629 (-) True G230221
TU312203 lncRNA downstream 463761 24691065 ~ 24728022 (-) True G230178
TU312360 lncRNA upstream 22476 25240169 ~ 25245092 (-) True G230293
TU312387 lncRNA upstream 131018 25348711 ~ 25349104 (-) True G230318
TU312454 lncRNA upstream 272390 25490083 ~ 25494355 (-) True G230367
TU312456 lncRNA upstream 272390 25490083 ~ 25494183 (-) False G230367
TU312457 lncRNA upstream 272390 25490083 ~ 25494183 (-) False G230367
XM_039792323.1 mRNA downstream 7298 25113999 ~ 25184485 (-) False LOC120553669
XM_039792320.1 mRNA downstream 7312 25113999 ~ 25184471 (-) False LOC120553669
XM_039792322.1 mRNA downstream 7312 25113999 ~ 25184471 (-) False LOC120553669
XM_039792321.1 mRNA downstream 7312 25113999 ~ 25184471 (-) False LOC120553669
XM_039792317.1 mRNA downstream 7312 25113999 ~ 25184471 (-) True LOC120553669
XM_039792354.1 mRNA upstream 284840 25502533 ~ 25524956 (-) True rint1
XM_039791988.1 mRNA upstream 339549 25557242 ~ 25567430 (-) True hspa14
XM_039791990.1 mRNA upstream 359770 25577463 ~ 25594098 (-) True irak3
XM_039791199.1 mRNA upstream 377885 25595578 ~ 25601380 (-) True LOC120553115
XM_039791201.1 mRNA upstream 385701 25603394 ~ 25606588 (-) False LOC120553116
unassigned_transcript_1528 other downstream 614762 24576950 ~ 24577021 (-) True trnap-agg_20
TU311926 other downstream 1277091 23908556 ~ 23914692 (-) True G229950
TU311924 other downstream 1277091 23912101 ~ 23914692 (-) False G229950
TU311825 other downstream 1479988 23692021 ~ 23711795 (-) True LOC120553170
TU311851 other downstream 1491585 23699697 ~ 23700198 (-) True G229907
TU312561 other upstream 377887 25595580 ~ 25601366 (-) False LOC120553115
TU312668 other upstream 962858 26180551 ~ 26196487 (-) False mkrn1
TU312734 other upstream 1157999 26375692 ~ 26381365 (-) True G230594
unassigned_transcript_1529 other upstream 1783359 27001052 ~ 27001123 (-) True trnaw-cca_36
TU312888 other upstream 1899513 27117206 ~ 27118597 (-) True G230730

Expression Profile