Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039792424.1 |
| length | 1373 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 8 |
| gene id | LOC120553730 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053134.1 |
| NCBI id | CM020931.1 |
| chromosome length | 29109922 |
| location | 8927072 ~ 8932977 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | biological_process |
| GO:0005615 | extracellular space | cellular_component |
| GO:0019239 | deaminase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU307374 | lncRNA | upstream | 43395 | 8881817 ~ 8883677 (+) | True | G226641 |
| TU307369 | lncRNA | upstream | 56361 | 8870018 ~ 8870711 (+) | True | G226638 |
| XR_005638149.1 | lncRNA | upstream | 306577 | 8617814 ~ 8620495 (+) | True | LOC120553277 |
| XR_005638150.1 | lncRNA | upstream | 306577 | 8617823 ~ 8620495 (+) | False | LOC120553277 |
| TU307280 | lncRNA | upstream | 567790 | 8356330 ~ 8359282 (+) | True | G226556 |
| TU307514 | lncRNA | downstream | 2073 | 8935050 ~ 8935551 (+) | True | G226720 |
| XR_005638190.1 | lncRNA | downstream | 8864 | 8941841 ~ 8943537 (+) | True | LOC120553611 |
| TU307510 | lncRNA | downstream | 79165 | 9012142 ~ 9012662 (+) | True | G226716 |
| TU307511 | lncRNA | downstream | 79866 | 9012843 ~ 9013646 (+) | True | G226717 |
| TU307544 | lncRNA | downstream | 82638 | 9015615 ~ 9015901 (+) | True | G226747 |
| XM_039791812.1 | mRNA | upstream | 276 | 8918234 ~ 8926796 (+) | True | atp6v1e1b |
| XM_039791533.1 | mRNA | upstream | 82047 | 8818570 ~ 8845025 (+) | True | gnptab |
| XM_039791534.1 | mRNA | upstream | 82047 | 8818570 ~ 8845025 (+) | False | gnptab |
| XM_039791532.1 | mRNA | upstream | 119902 | 8802548 ~ 8807170 (+) | True | washc3 |
| XM_039791529.1 | mRNA | upstream | 361717 | 8515588 ~ 8565355 (+) | True | acss3 |
| XM_039792293.1 | mRNA | downstream | 73581 | 9006558 ~ 9010187 (+) | True | LOC120553653 |
| XM_039792055.1 | mRNA | downstream | 84109 | 9017086 ~ 9020129 (+) | True | fgf23 |
| XM_039791611.1 | mRNA | downstream | 154196 | 9087173 ~ 9089548 (+) | True | llph |
| XM_039791818.1 | mRNA | downstream | 183828 | 9116805 ~ 9119985 (+) | True | guca1a |
| XM_039791817.1 | mRNA | downstream | 201617 | 9134594 ~ 9170380 (+) | False | lhfpl3 |
| TU307294 | other | upstream | 494375 | 8426691 ~ 8432697 (+) | True | rps16 |
| TU307011 | other | upstream | 1526673 | 7396494 ~ 7400399 (+) | False | nrip2 |
| XR_005638075.1 | other | upstream | 1594813 | 7323070 ~ 7332259 (+) | True | amdhd1 |
| TU307013 | other | upstream | 1606023 | 7318540 ~ 7321049 (+) | False | snrpf |
| unassigned_transcript_1480 | other | upstream | 1779732 | 7147269 ~ 7147340 (+) | True | trnaw-cca_35 |
| XR_005638164.1 | other | downstream | 201617 | 9134594 ~ 9173220 (+) | True | lhfpl3 |
| TU307644 | other | downstream | 304287 | 9237264 ~ 9241349 (+) | False | ndufb2 |
| unassigned_transcript_1481 | other | downstream | 1259349 | 10192326 ~ 10192412 (+) | True | trnay-gua_57 |
| unassigned_transcript_1482 | other | downstream | 1261453 | 10194430 ~ 10194516 (+) | True | trnay-gua_58 |
| unassigned_transcript_1483 | other | downstream | 1262143 | 10195120 ~ 10195206 (+) | True | trnay-gua_59 |
