RNA id: XM_039792469.1



Basic Information


Item Value
RNA id XM_039792469.1
length 1044
RNA type mRNA
GC content 0.50
exon number 8
gene id il15ra
representative False

Chromosome Information


Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 20620545 ~ 20640722 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GGATGAGCTATAAAGGCCGTGGTCTACTTGGCGAACATGTTTTAGGTCTCCGTAGAGCTGTCAGATGGACCTGGGTTTCTTTTTATTCTCTGTCATCTGTCTGCTCGGAGCTGCGCTGTGCTCCAACGGCGacaACATCAGTTGTCCGTGTCCAAATATTCCTTCATTTGATCTAACTGAACCTCCACCAGAGACCTGCTACCAAATTGCCGACGTTTTCCGCTACACATGCATTGGAGGTTACTCGAGGAAGGCGGGAACTTCAAATCTCATCAGATGCAAGCTTGAGGATGGTTCTTCAAAGTGGTCCACCCCTTCCCTTGAGTGTATAACTGACCCCAAAataaccaaaacacaaccaCCAAAGAGCACAGTAACAACGAGACACACTGATATTCCCCATGACTCCACCATTGCCACTTCAGTCACAGCAGCTTCCCCGACTGCAGAGAAGACCCAGAGTATAAGCACCACAGCTTCAGTGACTACAGGAAGAGACAGGACAGAGTCGACCTCAGCTGGTCTACCGGCCCAGACAAATCACTCACAGGcAGGAACTGTTGTGACAGAGACTAAAGGGACGCACCGGACAACATCAACCTCAACCACCACTGAGCCTTCAAGCAACAGGAACGTCTCTGCAAAGTCACCGACTGCTGCATTCGATCATGGCAGCACAACAACAGCGGTGATCGGCTGTGCTTCATTGGCCTTCGTCATAGCTTTGATCGGAATCAGCCTATATTGTTATAAAAGGAAGTCAAGAAACGGCATCCCACCAGAGCCAGCACAAGAACAGTTATACATGTATGTTCCATCTGACCAGGCGTCGTAGAGTTTGTTCTACGTGACCGGCCACTGCCACAGAGAGCAGCCACACAGCctaactagtctatatcgacgatgtTTCATTGACGGGATAGTTCCGGTGCCACTGGAggttccgctggatgtccctcatcccgagctttctttgtgttggcattctaaactccggtcaattcgggaaacatcctccgagctagaaccgacaatcaaattata

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU310822 lncRNA downstream 70821 20549498 ~ 20549724 (-) True G229109
TU310812 lncRNA downstream 73048 20546893 ~ 20547497 (-) True G229099
TU310811 lncRNA downstream 77609 20541188 ~ 20542936 (-) True G229098
TU310809 lncRNA downstream 83744 20536573 ~ 20536801 (-) True G229096
TU310808 lncRNA downstream 84948 20535285 ~ 20535597 (-) True G229095
TU310883 lncRNA upstream 30557 20668658 ~ 20668886 (-) True G229154
TU310893 lncRNA upstream 42991 20681092 ~ 20683865 (-) True G229162
TU310899 lncRNA upstream 64610 20702711 ~ 20703069 (-) True G229166
XR_005638201.1 lncRNA upstream 138302 20776403 ~ 20855266 (-) True LOC120553789
TU310900 lncRNA upstream 140982 20779083 ~ 20779370 (-) True G229167
XM_039792468.1 mRNA downstream 55560 20550034 ~ 20564985 (-) True cdc123
XM_039791147.1 mRNA downstream 75600 20537056 ~ 20544945 (-) True LOC120553073
XM_039791833.1 mRNA downstream 89801 20455675 ~ 20530744 (-) True camk1da
XM_039792012.1 mRNA downstream 190049 20410195 ~ 20430496 (-) False optn
XM_039792489.1 mRNA upstream 287072 20925173 ~ 21008235 (-) True ano2b
XM_039792490.1 mRNA upstream 287072 20925173 ~ 21008233 (-) False ano2b
XM_039792491.1 mRNA upstream 287072 20925173 ~ 20991788 (-) False ano2b
XM_039792098.1 mRNA upstream 384234 21022335 ~ 21046386 (-) True pik3cg
XM_039791070.1 mRNA upstream 425590 21063691 ~ 21145533 (-) False ptprz1b
TU310704 other downstream 498206 20067036 ~ 20122339 (-) False rerg
TU310602 other downstream 781243 19811245 ~ 19839302 (-) False etv6
TU310603 other downstream 781243 19811245 ~ 19839302 (-) False etv6
TU310604 other downstream 813447 19733102 ~ 19807098 (-) True G228934
unassigned_transcript_1502 other downstream 1167517 19452946 ~ 19453028 (-) True trnal-cag_24
TU310933 other upstream 319556 20957657 ~ 20958220 (-) True G229199
XR_005638087.1 other upstream 425590 21063691 ~ 21145533 (-) False ptprz1b
TU311312 other upstream 1132987 21771088 ~ 21811031 (-) False LOC120553090
TU311319 other upstream 1133035 21771136 ~ 21811097 (-) False LOC120553090
TU311637 other upstream 2466659 23104760 ~ 23239573 (-) True G229716

Expression Profile