RNA id: XM_039792489.1


Basic Information

Item Value
RNA id XM_039792489.1
length 4912
RNA type mRNA
GC content 0.49
exon number 27
gene id ano2b
representative True

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 20925173 ~ 21008235 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AATTAATGCACATTAGAGCGCCCAGTAATCTCTGCCCGTCTCTGTGTGGCTTTGCCGAACACCCAATCAGCCAGCCAGTCTGTTACCCACAAGCCCCGGTGTGCAGTGTATTAAGGGAGTGTACACAATAAGCTGAGTTGTGGAGTTTCTGCTATAGCCAGTCAGCCATTTGGAGGAGCATATTATCCAGGCAGAGCTAAGCCTCTGCTGAGCTGAGGATTGCACCACTGAGTCAgagtgttgctgttgttgttctcACCTGCTGCGGACAGCAAACCAGCATGGCTGACTGactcactgactgactgactgactgggaACTCAAAGGAAACTAGGCCTGCCTCTCAGCTGGAGTCACTCAGAGTTGAGGCGAAATGGCCCTCCGCAGATCCCCCTCCTCTACCTGTGCAGGATCATGGACCAATGGTGTGAGCTTCAGGCGAGTTGCCACAGCAATAAGCGAGTCGTCGTCCATCCACAGCGACGGCCTGTATCATCTGACCAAGGACATGTCCGGCATGGGACTGGACCCCATGTCCCACAGCATCCTGGAGCCTGCACCTTATAAACAACAACCCTGGGCTGAGGAATTAGAAACTTTgttacagCGCAACAGCATGCAGATAACCCCGAGTGAAGACAAAATCCCAGTTGTGGAGTCACTTTCAAGCCCTCGGGGCAGTGCAGAAGGCCTTTACTTCTCCGATGGCAAACGGAAAGTTGACTACGTTCTGGTCTTCCATCATCGGCGGCCCGCCTCCATACGATCTCGTGCCAGCGCCACAGTTTCACACGACAGGTTATCCATTGTTTCCAATGGCAACTTTGCCCCTTCGGTGGGCTCAGATCCGACGGCAGGAAGAGGCAGCATACCGAGAGTGGGGGCTGGCTGTGTCGGCGAGGTGTTCATGGAGCTTGGTCGTGCAGGAGGGAATGAGCTAACAGAGCCTGCTGACCATGAGATGCATCTAGTCAGACAGGAATTTGAGGCTAACCTGCTGGAGGCCGGCctggagatagagagagacagagagGTGAAGGCCCATGGCCCCAGCTTCACGCGTCTCCATGCGCCCTGGCCGGTACTATGTCGAGAGGCTGAGTTTCTCAAGATTAAAGTCCCCACCAAAACGagtTACGAACTTAAAGAGGAAAGTGGTTTCGGGTCCACTATGAACACAGTGTGGAGGAAAATGAACCAGCCTTTCCAGCCCAAAGTACCGCATCAGGACCAAGAACGCACCAAATTTCTCACGCACTGCTTCTCCAGGGAAAAACTCCAcctGTACAACatcacatctaaagacacatTCTTCGACAACGCCACAAGGGGCCGAATAGTATACGAGATCCTGAGGCGGACGGTGTGTGTACGAACCTGTCAAACCATAGgCATCAGCACATTGATAGCTAAAGGAGTATATGACGCATCCTTCCCTCTTCACGATGGTGACTATAAGGTCATCGGACACCTCGAGGAGAAGAGTGACAGACAGGTTCTGCATGACGAGTGGGCCAAATACTCAGCCTTTTACAAGTACCAGCCCATCGATCTGGTCAGGAAGTACTTTGGGGAGAAGATCGGTCTGTACTTTGCATGGCTCGGTGTTTACACTCAGCTGCTGATACCAGCCTCTATAGTGGGAATCATTGTGTTCGGCTATGGCGTGGCAACAGTGGATACAAATATACCCAGTCTGGAGATGTGTGACGAGCGTCTCAATTTCACCATGTGTCCTCTCTGTGACGGAGCCTGTGACTTCTGGAAGCTCAGCACTGCCTGCGGCACTGCCAGAGCTTCACACCTCTTCGACAACCCCGCCACAGTCTTCTTTGCCATCTTCATGTCTCTATGGGcgGTGCTGTTCCTGGAGCAATGGAAGCGCCGTCAGAACAGTTTGAGCCTCAGTTGGGATCTGACAGGCATCGAGGACGACGagGAACATCCCAGGCCAAAATACGAGACCATCCTCCTTcagaagagacagagggatCAGAaaaatcagaagaagaagaagaagaagaaaaagaatgagCCAGAGAAGCAGGAGGATGGGACAGTGACAGGAAAGGACAGATGGAGACAAAAACTACTGTCTGCCATGGCTGCAGGACCACCGTCTACCATAGAGAAGTTGACCTGGAAAGACCGTCTTCCTGGATACTTCATCAACGTTTCCTCTATCCTCTTTATGTTTGGCTTGACGTTTTCAGCAGTTTTCGGCGTCATCGTCTATCGCATCACAGTGTCGGCCCTGATAGCGATGAGCCCCGACCCGGAGACCAAGTCCAATGTTCGGGTGACGGTGACGGCCACTGCGGTCCTCATCAACCTGGTGGTTATTCTGATCCTCGATGAGATCTACGGCACTGTGGCGTTGTGGCTGACTGAGCTAGAGATTCCTAAAACAGAATCCAACTTTGAGGAGCGTCTCATCCTCAAAGCCTTCTTGCTCAAGTTTATGAACGCATACGCACCGATCTTTTATGTGGCTTTCTTCAAGGGACGgtTTGCTGGTCGACCTGGAGATTATGTGTATGTCTTTCAGGGTCATCGGATGGAAGAGTGTGCGCCAGGAGGCTGCCTCATCGAGTTGTGCATTCAGCTCAGCATCATCATGCTGGGCAAGCAGCTGATCCAGAACAACATCTTTGAGATCGGCATCCCGAAGTTGAAGAAGCTGGTGCGTGCATTAAAAGATAAAGGATCAGCGGAGAAGGAGATGGAGGGGGAGAGGCCTCCCCAGCAGTGGAACCTGGACTACGCCCTGGCTCCCTTTGACGGCCTCACGCCTGAATACATGGAGATGaTCATCCAGTTTGGTTTCGTCTCTCTGTTCGTGGCTTCGTTCCCGCTTGCTCCGCTCTTTGCTCTGCTCAACAACGTCATTGAGATCAGACTGGATGCCAAGAAGTTTGTGACGGAGCTACGCAGGCCAGTCGCCGTACGTGCTAAGGACATTGGTGTATGGTACAACATACTGAGTGGAATGGGAAAATTCTCAGTCATTATAAATGCCTTTGTGATCTCCTTCACATCAGACTTCATCCCCCGGCTCGTCTACCAGTACACGTTCAGTCAGACCGGCACCATGCACGGCTTCATTGACCACACGCTCTCCTACTTCAACGTGTCCAATTTCAAGCCTGGGTCGGCACCGCTGAACTTACAGCAAGGAAACATCTCCGTCTGCCGGTACAAAGACTACAGGGAGCCGCCCTGGTCTCCAGACGCATACATGGTCACCAAACAGTACTGGTGTGTCCTGGCTGCAAGACTGGCTTTCGTCATATTGTTCCAGaATCTGGTGATGTTCCTCAGCCTCGTGGTCGCCTGGGGGATCCCGGACGTTCCCAAAGCCGTCGTGGAGCAGTTCAAACGGGAGAAGAAGCTCCTGGTCGAGGTGTTCTTACGGGAAGAGAAGGAAAAATTCCAGCTCATCCAGAGCCTCTTCTCCAAGGACGCCAACCTCCGCCCAGCCAGCCACACGCTCCACCCGGGTCAGGGCTTGCCCATCCCGGGCCGCTACAGTACTCTACCCCCGCTTCCAACACAGGGCTTGGCCGGAGAAGGAGTGCCGAGAGCGAGGTGTAGGGCCGCCAGCTTCAGCCAGTTCACCGGGCAGATTCCCCCGACGCCCAGAAATGAAAACGAGAATTCAAAACACACGGCGGTGTGACAtggaacacacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatctgtagGACATCTGTGCTTAAGCTGGGCCTCGGGACTGGATAAACGTGTTGCTCTGGTGATTCAGTCCGTGAATATCTTTGcctgtgtcttttgtgtgtctgaCACAGTAGtagtgtgattaaaaaaaaaaaaaaaaaaatcacagcatcattTTGAAGACTTTTGAATTCATTGGTCTTAGTGTGGTTAAATGTGCAACGTCCACACTGGTCGAACGAGTGTCTGTGGTGTTCCTCCTCGCGTCGACTGTTCACCTGATAAAATGTtaggatttttactttttggTAAAAATCAATCAATGATTTAGCAAGGCACACTTGCTTAATAGCGTAGACAAGCAATAATTACAGTATTAGGCTGAACAATTGAATATTACAAGAACCTGGAAGAGActggaaataaagaaagaacTAATAACAAATGGACAGATTCATTGATGAGCACCTAATCAACGCAACGGATTGATGGACATGGGCTTATTACTAGGGCTGAGGACTGCTTTATGTGCTTATGctctatatgtatttatgtttttaccaGAATTTGTAGCATCTGCAACATTCCACATTTCCTGTacaatacattttaagacaTGGAACTGAAAGCACACAGGAGCCTCTCAGAAGTGCAAATCGTTTTCTGTACACCATTTACTGTTCCAGctgattttaaataaatcaaattcaGAAGTCACTTTGAATCATTTTCAGAATGCACCAAAATTGTAATGTTCGTCAGTACACAGCTGCTGGTTATTGTTTCTCTGCATTCTGCTCTACGTATTTGATGGATGGATGCACATGACAATGTGGCATACTGTTGCATGCCACTCCTAGATTATAGTCCAAGCTGTAGTTTTAAGAATAGATCTgtgaagaaaatgttttatttttctgttagcCATATGGACTTTACAGCTGTCAACTGAGTGAGAGCGACTTAATAACTACACTTAATAACTTCTGAATGCACAGAGAAAGCCAACTCTTTTGCAAACTGTTAATGGCAGTGAGCTAGAAATGACCTCACTGCTCATTGTCAAGGGAAGACATGCTTCCCTTGACAACACTTCCTTTTGAAATACCAGACTGTATACTCTGACATTCCTGCAGGTCAGTAATAAATCTGGGTTACTACTGCCCAAATAGAACCGTT

Function

GO: NA

KEGG:

id description
K19497 ANO2, TMEM16B; anoctamin-2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU310905 lncRNA downstream 57644 20867300 ~ 20867529 (-) True G229172
XR_005638201.1 lncRNA downstream 69907 20776403 ~ 20855266 (-) True LOC120553789
TU310901 lncRNA downstream 145265 20779683 ~ 20779908 (-) True G229168
TU310900 lncRNA downstream 145803 20779083 ~ 20779370 (-) True G229167
TU310899 lncRNA downstream 222104 20702711 ~ 20703069 (-) True G229166
TU310982 lncRNA upstream 11024 21019259 ~ 21062436 (-) True G229235
TU310983 lncRNA upstream 11024 21019259 ~ 21062436 (-) False G229235
TU310999 lncRNA upstream 190233 21198468 ~ 21199259 (-) True G229248
TU311069 lncRNA upstream 256266 21264501 ~ 21264812 (-) True G229296
TU311129 lncRNA upstream 442228 21450463 ~ 21453152 (-) True G229351
XM_039792470.1 mRNA downstream 284451 20620545 ~ 20640722 (-) True il15ra
XM_039792475.1 mRNA downstream 287072 20620545 ~ 20638101 (-) False il15ra
XM_039792473.1 mRNA downstream 287072 20620545 ~ 20638101 (-) False il15ra
XM_039792472.1 mRNA downstream 287072 20620545 ~ 20638101 (-) False il15ra
XM_039792474.1 mRNA downstream 287072 20620545 ~ 20638101 (-) False il15ra
XM_039792098.1 mRNA upstream 14100 21022335 ~ 21046386 (-) True pik3cg
XM_039791070.1 mRNA upstream 55456 21063691 ~ 21145533 (-) False ptprz1b
XM_039791069.1 mRNA upstream 55456 21063691 ~ 21145533 (-) False ptprz1b
XM_039791071.1 mRNA upstream 55456 21063691 ~ 21138485 (-) True ptprz1b
XM_039791073.1 mRNA upstream 144966 21153201 ~ 21183826 (-) True slc13a4
TU310704 other downstream 802834 20067036 ~ 20122339 (-) False rerg
TU310602 other downstream 1085871 19811245 ~ 19839302 (-) False etv6
TU310603 other downstream 1085871 19811245 ~ 19839302 (-) False etv6
TU310604 other downstream 1118075 19733102 ~ 19807098 (-) True G228934
unassigned_transcript_1502 other downstream 1472145 19452946 ~ 19453028 (-) True trnal-cag_24
XR_005638087.1 other upstream 55456 21063691 ~ 21145533 (-) False ptprz1b
TU311312 other upstream 762853 21771088 ~ 21811031 (-) False LOC120553090
TU311319 other upstream 762901 21771136 ~ 21811097 (-) False LOC120553090
TU311637 other upstream 2096525 23104760 ~ 23239573 (-) True G229716
TU311825 other upstream 2683786 23692021 ~ 23711795 (-) True LOC120553170

Expression Profile