RNA id: XM_039792492.1


Basic Information

Item Value
RNA id XM_039792492.1
length 2858
RNA type mRNA
GC content 0.48
exon number 16
gene id pfkfb3
representative True

Chromosome Information

Item Value
chromosome id NC_053134.1
NCBI id CM020931.1
chromosome length 29109922
location 20678049 ~ 20689946 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AGACCGGCAGATTAGCTCGGCTCAACGCGCTCTACAGACATTGACAACAGCTCAGTTCATTCCTTCTGAACGGACGAGGCTCCTGCTCAAACAACCACcggctcttcttttttttttgtccccgGAATCTAAAGCAGCTCGGTTCTCGTGTACTGTGCGGCTCTTCAGTCCTTGAGGAATGCCCAGAGAGCTTACCCAGAACAGGATCCAAAAGATCTGGGTGCCCACCAAGGATGACAAGCCGGCACCCCGGAGAGCGGCTTGCGCCCCCCACTTTGCCAACCCCCCAACCGTCATCGTGATGGTGGGTCTTCCGGCTCGAGGGAAGAcctacatgtccaaaaaactcaCTCGCTACCTCAACTGGATCGGCATGCCCACCAAAGtcTTCAATGTGGGAGAGTACCGGAGGGAGGCGGTCAAGAACTACAGCTCCTATGACTTCTTCAAGTCTGATAATGAGTGCGCCGTGAAAATCAGACAGCAATGTGCCTTAGCAGCCTTGAGGGATGTCAAATCCTATTTGAAGGAGGAGGGAGGCCAAGTAGCGGTCTTCGACGCCACAAACACGACGCGAGAAAGACGAGACATGATCCTTCAGTTTGGCAGTGAGAATGGCTTCAAGATCTTTTTCATCGAGTCGGTGTGCGACGATCCCAGCGTGATCGCGTCGAACATCATGGAAGTGAAGGTGTCGTGTCCAGACTACCGGGACTGCAACAAAAACGACGCCATGTTGGATTTCCAGAGGAGAATCGAATGCTACAAAACCAGCTACCAACCCCTGGACCCCAATCAGTACGACAGGGATCTCTCTTTCATCAAGGTGATAGACGTGGGTCGGCGCTTCCTCGTCAACCGGATCCAGGACCACATCCAGAGCAAGATCGTCTACTACCTGATGAACATCCACGTCCAGCCACGCACCATCTACCTGTGTCGGCACGGAGAGAGCACCGACAACGTGGAGGGCCGGCTGGGCGGGGACGCAGGCCTCTCGCCGCGGGGCAAACAGTTTTCGGCTGCCCTGGCTCGGTTTGtggaagagcagcagcagaaggaTCTCAAGGTTTGGAGCAGCCAGCTGTGTCGCAGCATCGAGACCGCAGAGCACCTGGGAGTCCCGTACGAACAGTGGAAGGCTCTCAACGAGATAGACGCTGGAATGTGTGAAGAGATGACGTATGATGAGATGAAGGAGAAATTCCCGGAGGAGTTTGCTTTGAGAGATGAGGATAAATACTACTATCGCTACCCTGCTGGAGAGTCTTACCAGGACCTGGTCCAGCGGGTGGAGCCAGTCATCATGGACCTGGAGAGGCAAGAGAACGTCCTGGTTATCTGCCACCAGGCTGTCATGCGCTGCCTGCTGGCCTACTTCCTGGATAAGAGTGCAGAGGAGATGCCCTACCTGAAGTGTCCCCTCCACACGGTGCTGAAGCTCACCCCGGTCGCCTATGGGTGCAAAGTGGAGTCCATCTCTCTGAATGTGGAGGCGGTGAATACCCACAGAGACCGACCTGAGGAGGTGAAGAAGGGTCCTGGCACCTTGATCAGGCGGAACAGTGTGACTCCTCTGACCAGCCCCGAGTCAAACATCAAGAAACCTCGCATCGATGACCTAGACGAGTCTCCGATCCAGGAGCTGCCTCCATCTGTTGCCTCGCTGGCACTCTGCAGCCCCTCGCACCTCCCTATCACTCTGGCTGGACAGCATTGGCTGGGCAAAGTTTGCCTACGAAGCATCCTCCAATATCTGAAAGTGGTTTCACTCTTTGTCTTTCAAAGAACCTGAGGAGAAACTCATCTAGCCACCGGGATGTCCTGCAGCCCTGCCAATAAAACTGCACCGATGTGTCACGTGGCACAAGAGGCCGGAAAGTTGATCGCTGACAAAGGCTCACTGAAGGCAATGACATGAAAAAGAAGGAAGAGTTAAATTGATGAGTTATTTGTCAGCCAAAGACACAAGTAACCACCTATATTGGCGTTTATCATGCACGCTTTTCTAAAAATATGTGCAAAAGAAGAGCGTCATGACGTAATTGACTCCTTTGTATGCTGACACTATAAAATAAGCGATTATTTTGCACAGTGGGGGTACatttgtacttttgtttttattttgtgtcactATGTATTTCTCATGTCACTGTATTGAAGGTGATATTTTGCCGTAGAGTGCCTGTAGTGCTTGTTTTGCAAGCCTTACGCCACTTCTCTTGCCATTTCTCTGGAATTGATTGCTCGAGAGGGGGCACCACATTTCACCTAATAACTCCACATATCACGtcaatattttacttttcacagtttgaaatatttatttttcattgtgttTAGTTTCAACGCTACGGTGCACGCTGATCATTTAACAGAGTTCTTAATTTTCAAGTTGAATTACCTTGATTTCCTTTTGCTGTCATTGTCTGCTACGCACAAATGGAAGCACCTATATTTTGTTATAACAATGCGTGCTGTTAATAATATCTTTGTAAATGTTAATGTATATACAGAAAAACTGGAGATGCTTAGGAGATGACTTTCACGGGAGACTTTtgatgaaaatgtgtgtgtagaaGTATTTTTGTACTAATGGAAAGCACGATCTGTTGAGAAAGAAGCTGCTGCTTACCTCTCTCAGTAAAACCTACGTTAACAAGTTTGCTTGACATACttgaaatttgttttttgtaaaaactgttttattatattccttatttattttgtatgtagTTTTGGATGCTTGGAGCGAGAGACACCTTGTTTTAATCTGAGGACTATTCATGAGAGAACAGTATGTTGTACAGTTGATTTTTGCATCTGCTGGACCAATAAATTAACTCCTGGAAAACATA

Function

GO: NA

KEGG:

id description
K01103 PFKFB3; 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU310845 lncRNA upstream 70519 20607232 ~ 20607530 (+) True G229130
TU310821 lncRNA upstream 112869 20563063 ~ 20565180 (+) True G229108
TU310762 lncRNA upstream 223261 20442667 ~ 20454788 (+) True G229060
TU310756 lncRNA upstream 229492 20439458 ~ 20448557 (+) True G229058
TU310674 lncRNA upstream 376608 20298734 ~ 20301441 (+) True G228989
TU310915 lncRNA downstream 234002 20923948 ~ 20925059 (+) True G229182
TU310941 lncRNA downstream 348002 21037948 ~ 21062435 (+) True G229205
TU310964 lncRNA downstream 458347 21148293 ~ 21150281 (+) False LOC120553023
TU310977 lncRNA downstream 530502 21220448 ~ 21220812 (+) True G229233
TU311018 lncRNA downstream 574450 21264396 ~ 21264699 (+) True G229263
XM_039792274.1 mRNA upstream 22135 20642907 ~ 20655914 (+) True rbm17
XM_039792275.1 mRNA upstream 22135 20642907 ~ 20655914 (+) False rbm17
XM_039792465.1 mRNA upstream 74870 20570988 ~ 20603179 (+) True fbxo18
XM_039792466.1 mRNA upstream 107489 20565597 ~ 20570560 (+) False nudt5
XM_039792467.1 mRNA upstream 107489 20565804 ~ 20570560 (+) True nudt5
XM_039792497.1 mRNA downstream 126173 20816119 ~ 20864618 (+) True ntf3
XM_039792498.1 mRNA downstream 127633 20817579 ~ 20864618 (+) False ntf3
XM_039792499.1 mRNA downstream 169260 20859206 ~ 20864618 (+) False ntf3
XM_039792500.1 mRNA downstream 207273 20897219 ~ 20906821 (+) True LOC120553788
XM_039792300.1 mRNA downstream 357991 21047937 ~ 21059082 (+) True LOC120553657
TU310736 other upstream 286643 20382426 ~ 20391406 (+) False ucmaa
TU310663 other upstream 504650 20147078 ~ 20173399 (+) False LOC120553749
TU310661 other upstream 504650 20170719 ~ 20173399 (+) False LOC120553749
TU310593 other upstream 692401 19982248 ~ 19985648 (+) True G228924
XR_005638132.1 other upstream 869637 19631947 ~ 19808412 (+) False LOC120553210
unassigned_transcript_1504 other downstream 889367 21579313 ~ 21579423 (+) True trnal-caa_25
unassigned_transcript_1505 other downstream 889958 21579904 ~ 21580014 (+) True trnal-caa_26
unassigned_transcript_1506 other downstream 890306 21580252 ~ 21580362 (+) True trnal-caa_27
unassigned_transcript_1507 other downstream 890551 21580497 ~ 21580607 (+) True trnal-caa_28
unassigned_transcript_1508 other downstream 890796 21580742 ~ 21580852 (+) True trnal-caa_29

Expression Profile