Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005638108.1 |
| length | 325 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 3 |
| gene id | LOC120553126 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053134.1 |
| NCBI id | CM020931.1 |
| chromosome length | 29109922 |
| location | 6183044 ~ 6289899 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU306637 | lncRNA | upstream | 85136 | 6097678 ~ 6097908 (+) | True | G226097 |
| TU306625 | lncRNA | upstream | 263630 | 5919094 ~ 5919414 (+) | True | G226085 |
| TU306571 | lncRNA | upstream | 406611 | 5750128 ~ 5776433 (+) | True | G226042 |
| TU306558 | lncRNA | upstream | 629719 | 5552521 ~ 5553325 (+) | True | G226029 |
| TU306557 | lncRNA | upstream | 630571 | 5552253 ~ 5552473 (+) | True | G226028 |
| XR_005638192.1 | lncRNA | downstream | 139195 | 6429094 ~ 6501060 (+) | True | LOC120553621 |
| TU306694 | lncRNA | downstream | 392819 | 6682718 ~ 6686625 (+) | False | prkcq |
| TU306925 | lncRNA | downstream | 867591 | 7157490 ~ 7157887 (+) | True | G226292 |
| TU306949 | lncRNA | downstream | 923493 | 7213392 ~ 7216386 (+) | True | G226306 |
| TU306966 | lncRNA | downstream | 977610 | 7267509 ~ 7268219 (+) | False | G226316 |
| XM_039791340.1 | mRNA | upstream | 783741 | 5393640 ~ 5399303 (+) | True | echdc3 |
| XM_039791339.1 | mRNA | upstream | 790104 | 5383033 ~ 5392940 (+) | False | kcnj8 |
| XM_039791338.1 | mRNA | upstream | 790104 | 5383034 ~ 5392940 (+) | True | kcnj8 |
| XM_039792020.1 | mRNA | upstream | 809407 | 5283759 ~ 5373637 (+) | False | abcc9 |
| XM_039792084.1 | mRNA | downstream | 223946 | 6513845 ~ 6519452 (+) | True | kin |
| XM_039791177.1 | mRNA | downstream | 245276 | 6535175 ~ 6553086 (+) | True | itih5 |
| XM_039791178.1 | mRNA | downstream | 289213 | 6579112 ~ 6636681 (+) | False | sfmbt2 |
| XM_039791183.1 | mRNA | downstream | 289213 | 6579112 ~ 6636681 (+) | False | sfmbt2 |
| XM_039791182.1 | mRNA | downstream | 289659 | 6579558 ~ 6636681 (+) | False | sfmbt2 |
| XR_005638175.1 | other | upstream | 809841 | 5283759 ~ 5373203 (+) | False | abcc9 |
| XR_005638176.1 | other | upstream | 809841 | 5283759 ~ 5373203 (+) | False | abcc9 |
| XR_005638177.1 | other | upstream | 809841 | 5283759 ~ 5373203 (+) | False | abcc9 |
| TU306390 | other | upstream | 1525075 | 4657444 ~ 4657969 (+) | True | G225894 |
| unassigned_transcript_1479 | other | upstream | 1986229 | 4196705 ~ 4196815 (+) | True | trnal-caa_19 |
| unassigned_transcript_1480 | other | downstream | 857370 | 7147269 ~ 7147340 (+) | True | trnaw-cca_35 |
| TU307013 | other | downstream | 1028641 | 7318540 ~ 7321049 (+) | False | snrpf |
| XR_005638075.1 | other | downstream | 1033171 | 7323070 ~ 7332259 (+) | True | amdhd1 |
| TU307011 | other | downstream | 1106595 | 7396494 ~ 7400399 (+) | False | nrip2 |
| TU307294 | other | downstream | 2136792 | 8426691 ~ 8432697 (+) | True | rps16 |
