Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005638112.1 |
| length | 546 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 3 |
| gene id | LOC120553135 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053134.1 |
| NCBI id | CM020931.1 |
| chromosome length | 29109922 |
| location | 10639747 ~ 10660499 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | description |
|---|---|
| ko04141 | Protein processing in endoplasmic reticulum |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU308027 | lncRNA | downstream | 101331 | 10538204 ~ 10538416 (-) | True | G227089 |
| XR_005638174.1 | lncRNA | downstream | 101910 | 10509731 ~ 10537837 (-) | True | LOC120553506 |
| TU307912 | lncRNA | downstream | 355662 | 10220956 ~ 10284085 (-) | False | G227020 |
| XR_005638210.1 | lncRNA | upstream | 279879 | 10940378 ~ 10942825 (-) | False | LOC120553801 |
| TU308148 | lncRNA | upstream | 279890 | 10940389 ~ 10942789 (-) | True | LOC120553801 |
| TU308149 | lncRNA | upstream | 279890 | 10940389 ~ 10942789 (-) | False | LOC120553801 |
| XR_005638209.1 | lncRNA | upstream | 280093 | 10940592 ~ 10942825 (-) | False | LOC120553801 |
| TU308150 | lncRNA | upstream | 280532 | 10941031 ~ 10942789 (-) | False | LOC120553801 |
| XM_039792427.1 | mRNA | downstream | 3827 | 10634748 ~ 10635920 (-) | True | LOC120553733 |
| XM_039792057.1 | mRNA | downstream | 7370 | 10624020 ~ 10632377 (-) | True | tcp11l2 |
| XM_039791796.1 | mRNA | downstream | 16579 | 10564430 ~ 10623168 (-) | False | apaf1 |
| XM_039791797.1 | mRNA | downstream | 16579 | 10564430 ~ 10623168 (-) | False | apaf1 |
| XM_039791795.1 | mRNA | downstream | 16579 | 10564430 ~ 10623168 (-) | True | apaf1 |
| XM_039791224.1 | mRNA | upstream | 421 | 10660920 ~ 10665486 (-) | False | si:ch211-244b2.3 |
| XM_039791223.1 | mRNA | upstream | 421 | 10660920 ~ 10665486 (-) | True | si:ch211-244b2.3 |
| XM_039791226.1 | mRNA | upstream | 6003 | 10666502 ~ 10671184 (-) | False | si:ch211-244b2.4 |
| XM_039791225.1 | mRNA | upstream | 6003 | 10666502 ~ 10671184 (-) | True | si:ch211-244b2.4 |
| XM_039791227.1 | mRNA | upstream | 13960 | 10674459 ~ 10694296 (-) | True | epyc |
| TU308019 | other | downstream | 116785 | 10513494 ~ 10522962 (-) | True | G227082 |
| unassigned_transcript_1485 | other | downstream | 443314 | 10196347 ~ 10196433 (-) | True | trnay-gua_61 |
| unassigned_transcript_1484 | other | downstream | 443877 | 10195784 ~ 10195870 (-) | True | trnay-gua_60 |
| XR_005638146.1 | other | downstream | 1884915 | 8572959 ~ 8754832 (-) | False | ppfia2 |
| XR_005638148.1 | other | downstream | 1953810 | 8565242 ~ 8685937 (-) | False | ppfia2 |
| TU308180 | other | upstream | 319699 | 10980198 ~ 10981259 (-) | True | G227197 |
| XR_005638189.1 | other | upstream | 963510 | 11624009 ~ 11676832 (-) | False | pcloa |
| XR_005638137.1 | other | upstream | 1178445 | 11838944 ~ 11848941 (-) | False | cracr2ab |
| TU308500 | other | upstream | 1624427 | 12284926 ~ 12288154 (-) | True | G227429 |
| TU308872 | other | upstream | 2859766 | 13520265 ~ 13529778 (-) | False | LOC120553470 |
