RNA id: TU313818


Basic Information

Item Value
RNA id TU313818
length 225
lncRNA type inter_gene
GC content 0.56
exon number 2
gene id G231443
representative True

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 1502376 ~ 1502768 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tcacttcccgctgcctcaagatagcaatactcccagaatgcacctgaacacacctccctggaagaccagcacgcccagaatgcacctgaacacacctccctgtaagaccagcacgcccagaatgcacctgaacacacctccctgtaagaccagcacgcccagaatgcacctgaacacacctccctgtaagacaggcacgcccagaatgcacctgaacacacctcc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU313816 lncRNA upstream 4313 1497393 ~ 1498063 (+) True G231441
TU313795 lncRNA upstream 8009 1493713 ~ 1494367 (+) False G231427
TU313801 lncRNA upstream 78948 1421082 ~ 1423428 (+) True G231430
TU313802 lncRNA upstream 88992 1412948 ~ 1413384 (+) True G231431
TU313800 lncRNA upstream 89861 1411165 ~ 1412515 (+) True G231429
TU313830 lncRNA downstream 49501 1552269 ~ 1552974 (+) True G231454
TU313785 lncRNA downstream 53026 1555794 ~ 1679054 (+) False G231423
TU313787 lncRNA downstream 81216 1583984 ~ 1588772 (+) True G231425
TU313838 lncRNA downstream 81760 1584528 ~ 1651818 (+) False G231458
TU313934 lncRNA downstream 105858 1608626 ~ 1760723 (+) True G231462
XM_039792663.1 mRNA upstream 19395 1478028 ~ 1482981 (+) True gbx2
XM_039793791.1 mRNA upstream 105799 1383910 ~ 1396577 (+) True LOC120554760
XM_039793792.1 mRNA upstream 105799 1385672 ~ 1396577 (+) False LOC120554760
XM_039793721.1 mRNA upstream 248801 1237578 ~ 1253575 (+) True LOC120554718
XM_039793802.1 mRNA upstream 276127 1215027 ~ 1226249 (+) True LOC120554773
XM_039792664.1 mRNA downstream 925 1503693 ~ 1521064 (+) False LOC120554068
XM_039793640.1 mRNA downstream 230813 1733581 ~ 1743392 (+) True LOC120554628
XM_039793804.1 mRNA downstream 246510 1749278 ~ 1781427 (+) True mlpha
XM_039792600.1 mRNA downstream 306377 1809145 ~ 1810702 (+) True LOC120554028
XM_039793630.1 mRNA downstream 325758 1828526 ~ 1839241 (+) True LOC120554615
TU313797 other upstream 5769 1487274 ~ 1496607 (+) True G231428
TU313705 other upstream 52200 1235697 ~ 1450176 (+) True G231361
TU313737 other upstream 99322 1340246 ~ 1403054 (+) True LOC120554625
TU313676 other upstream 400150 1069687 ~ 1102226 (+) False G231356
TU313783 other downstream 83284 1586052 ~ 1687667 (+) False G231423
TU313866 other downstream 230741 1733509 ~ 1747994 (+) False G231461
TU313931 other downstream 230741 1733509 ~ 1747994 (+) False G231461
TU313847 other downstream 245305 1748073 ~ 1775613 (+) False G231461
TU313924 other downstream 245305 1748073 ~ 1775613 (+) False G231461

Expression Profile