Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU318727 |
| length | 306 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G234752 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053135.1 |
| NCBI id | CM020932.1 |
| chromosome length | 21835524 |
| location | 14356095 ~ 14356400 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU318711 | lncRNA | downstream | 58718 | 14297080 ~ 14297377 (-) | True | G234736 |
| TU318672 | lncRNA | downstream | 135927 | 14195210 ~ 14220168 (-) | False | arhgap1 |
| TU318670 | lncRNA | downstream | 143957 | 14194312 ~ 14212138 (-) | False | arhgap1 |
| TU318671 | lncRNA | downstream | 152894 | 14194493 ~ 14203201 (-) | True | arhgap1 |
| TU318638 | lncRNA | downstream | 165857 | 14190031 ~ 14190238 (-) | True | G234676 |
| XR_005638310.1 | lncRNA | upstream | 121026 | 14477426 ~ 14483964 (-) | False | LOC120554079 |
| TU318761 | lncRNA | upstream | 121026 | 14477426 ~ 14484029 (-) | True | LOC120554079 |
| XR_005638309.1 | lncRNA | upstream | 121034 | 14477434 ~ 14483964 (-) | False | LOC120554079 |
| TU318784 | lncRNA | upstream | 181441 | 14537841 ~ 14542320 (-) | True | G234802 |
| TU318814 | lncRNA | upstream | 242736 | 14599136 ~ 14600022 (-) | False | G234828 |
| XM_039793277.1 | mRNA | downstream | 56405 | 14290673 ~ 14299690 (-) | True | LOC120554388 |
| XM_039793275.1 | mRNA | downstream | 66052 | 14201336 ~ 14290043 (-) | False | arhgap1 |
| XM_039792668.1 | mRNA | upstream | 430 | 14356830 ~ 14399370 (-) | False | slc19a2 |
| XM_039792667.1 | mRNA | upstream | 430 | 14356830 ~ 14399370 (-) | False | slc19a2 |
| XM_039792669.1 | mRNA | upstream | 430 | 14356830 ~ 14392648 (-) | False | slc19a2 |
| XM_039792670.1 | mRNA | upstream | 430 | 14356830 ~ 14391028 (-) | True | slc19a2 |
| XM_039792671.1 | mRNA | upstream | 430 | 14356830 ~ 14390576 (-) | False | slc19a2 |
| unassigned_transcript_1568 | other | downstream | 1243867 | 13112158 ~ 13112228 (-) | True | trnag-gcc_27 |
| unassigned_transcript_1567 | other | downstream | 1299408 | 13056616 ~ 13056687 (-) | True | trnad-guc_30 |
| unassigned_transcript_1566 | other | downstream | 1370207 | 12985817 ~ 12985888 (-) | True | trnae-uuc_66 |
| TU318311 | other | downstream | 1401970 | 12953090 ~ 12954125 (-) | True | G234405 |
| TU318109 | other | downstream | 2062952 | 12287920 ~ 12293143 (-) | False | G234253 |
| TU318891 | other | upstream | 491434 | 14847834 ~ 14849737 (-) | True | G234898 |
| unassigned_transcript_1569 | other | upstream | 605961 | 14962361 ~ 14962433 (-) | True | trnar-ccg_4 |
| XR_005638386.1 | other | upstream | 613122 | 14969522 ~ 15013814 (-) | False | LOC120554377 |
| unassigned_transcript_1570 | other | upstream | 1429921 | 15786321 ~ 15786392 (-) | True | trnaq-uug_6 |
| unassigned_transcript_1571 | other | upstream | 1431927 | 15788327 ~ 15788399 (-) | True | trnak-cuu_17 |
