Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU318761 |
| length | 421 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 3 |
| gene id | LOC120554079 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053135.1 |
| NCBI id | CM020932.1 |
| chromosome length | 21835524 |
| location | 14477426 ~ 14484029 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU318727 | lncRNA | downstream | 121026 | 14356095 ~ 14356400 (-) | True | G234752 |
| TU318711 | lncRNA | downstream | 180049 | 14297080 ~ 14297377 (-) | True | G234736 |
| TU318672 | lncRNA | downstream | 257258 | 14195210 ~ 14220168 (-) | False | arhgap1 |
| TU318670 | lncRNA | downstream | 265288 | 14194312 ~ 14212138 (-) | False | arhgap1 |
| TU318784 | lncRNA | upstream | 53812 | 14537841 ~ 14542320 (-) | True | G234802 |
| TU318814 | lncRNA | upstream | 115107 | 14599136 ~ 14600022 (-) | False | G234828 |
| TU318813 | lncRNA | upstream | 115151 | 14599180 ~ 14600286 (-) | True | G234828 |
| TU318887 | lncRNA | upstream | 322603 | 14806632 ~ 14828409 (-) | True | G234896 |
| TU318929 | lncRNA | upstream | 602921 | 15086950 ~ 15087401 (-) | True | G234927 |
| XM_039792675.1 | mRNA | downstream | 31330 | 14434308 ~ 14446096 (-) | False | LOC120554074 |
| XM_039792674.1 | mRNA | downstream | 31330 | 14434308 ~ 14446096 (-) | True | LOC120554074 |
| XM_039792673.1 | mRNA | downstream | 57435 | 14400865 ~ 14419991 (-) | False | atg3 |
| XM_039792672.1 | mRNA | downstream | 57435 | 14400865 ~ 14419991 (-) | True | atg3 |
| XM_039792671.1 | mRNA | downstream | 86850 | 14356830 ~ 14390576 (-) | False | slc19a2 |
| XM_039793117.1 | mRNA | upstream | 61711 | 14545740 ~ 14569910 (-) | True | LOC120554302 |
| XM_039793536.1 | mRNA | upstream | 117126 | 14601155 ~ 14614899 (-) | False | LOC120554575 |
| XM_039793534.1 | mRNA | upstream | 117126 | 14601155 ~ 14614899 (-) | False | LOC120554575 |
| XM_039793535.1 | mRNA | upstream | 117126 | 14601155 ~ 14614899 (-) | False | LOC120554575 |
| XM_039793533.1 | mRNA | upstream | 117126 | 14601155 ~ 14614899 (-) | True | LOC120554575 |
| unassigned_transcript_1568 | other | downstream | 1365198 | 13112158 ~ 13112228 (-) | True | trnag-gcc_27 |
| unassigned_transcript_1567 | other | downstream | 1420739 | 13056616 ~ 13056687 (-) | True | trnad-guc_30 |
| unassigned_transcript_1566 | other | downstream | 1491538 | 12985817 ~ 12985888 (-) | True | trnae-uuc_66 |
| TU318311 | other | downstream | 1523301 | 12953090 ~ 12954125 (-) | True | G234405 |
| TU318109 | other | downstream | 2184283 | 12287920 ~ 12293143 (-) | False | G234253 |
| TU318891 | other | upstream | 363805 | 14847834 ~ 14849737 (-) | True | G234898 |
| unassigned_transcript_1569 | other | upstream | 478332 | 14962361 ~ 14962433 (-) | True | trnar-ccg_4 |
| XR_005638386.1 | other | upstream | 485493 | 14969522 ~ 15013814 (-) | False | LOC120554377 |
| unassigned_transcript_1570 | other | upstream | 1302292 | 15786321 ~ 15786392 (-) | True | trnaq-uug_6 |
| unassigned_transcript_1571 | other | upstream | 1304298 | 15788327 ~ 15788399 (-) | True | trnak-cuu_17 |
