Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU319285 |
| length | 1316 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G235216 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053135.1 |
| NCBI id | CM020932.1 |
| chromosome length | 21835524 |
| location | 16221420 ~ 16222735 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0006376 | mRNA splice site selection | biological_process |
| GO:0000245 | spliceosomal complex assembly | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU319250 | lncRNA | upstream | 25720 | 16195562 ~ 16195700 (+) | True | G235185 |
| TU319242 | lncRNA | upstream | 94629 | 16125819 ~ 16126791 (+) | False | LOC120554276 |
| XR_005638350.1 | lncRNA | upstream | 94779 | 16125461 ~ 16126641 (+) | True | LOC120554276 |
| TU319214 | lncRNA | upstream | 337410 | 15883763 ~ 15884010 (+) | True | G235152 |
| TU319126 | lncRNA | upstream | 537930 | 15676977 ~ 15683490 (+) | True | LOC120554272 |
| TU319332 | lncRNA | downstream | 100106 | 16322841 ~ 16324217 (+) | False | G235243 |
| TU319333 | lncRNA | downstream | 100106 | 16322841 ~ 16324248 (+) | True | G235243 |
| XR_005638354.1 | lncRNA | downstream | 340692 | 16563427 ~ 16566044 (+) | True | LOC120554281 |
| TU319398 | lncRNA | downstream | 371463 | 16594198 ~ 16594849 (+) | True | G235284 |
| TU319436 | lncRNA | downstream | 617451 | 16840186 ~ 16840829 (+) | True | G235321 |
| XM_039793039.1 | mRNA | upstream | 734 | 16201422 ~ 16220686 (+) | True | LOC120554255 |
| XM_039792546.1 | mRNA | upstream | 26568 | 16183840 ~ 16194852 (+) | True | LOC120553997 |
| XM_039792964.1 | mRNA | upstream | 45392 | 16171047 ~ 16176028 (+) | True | LOC120554217 |
| XM_039792989.1 | mRNA | upstream | 68547 | 16140119 ~ 16152873 (+) | True | LOC120554230 |
| XM_039793029.1 | mRNA | upstream | 100412 | 16101835 ~ 16121008 (+) | True | LOC120554250 |
| XM_039792993.1 | mRNA | downstream | 165962 | 16388697 ~ 16612671 (+) | False | LOC120554234 |
| XM_039792995.1 | mRNA | downstream | 165962 | 16388697 ~ 16612671 (+) | False | LOC120554234 |
| XM_039792998.1 | mRNA | downstream | 165962 | 16388697 ~ 16450920 (+) | True | LOC120554234 |
| XM_039792999.1 | mRNA | downstream | 165962 | 16388697 ~ 16394012 (+) | False | LOC120554234 |
| XM_039793000.1 | mRNA | downstream | 165962 | 16388697 ~ 16394012 (+) | False | LOC120554234 |
| unassigned_transcript_1640 | other | upstream | 54799 | 16166549 ~ 16166621 (+) | True | trnat-cgu_14 |
| unassigned_transcript_1639 | other | upstream | 58465 | 16162882 ~ 16162955 (+) | True | trnat-agu_39 |
| unassigned_transcript_1638 | other | upstream | 154104 | 16067244 ~ 16067316 (+) | True | trnak-cuu_33 |
| unassigned_transcript_1637 | other | upstream | 154794 | 16066553 ~ 16066626 (+) | True | trnat-agu_38 |
| unassigned_transcript_1636 | other | upstream | 155110 | 16066240 ~ 16066310 (+) | True | trnak-cuu_32 |
| unassigned_transcript_1641 | other | downstream | 2020 | 16224755 ~ 16224827 (+) | True | trnat-ugu_42 |
| XR_005638335.1 | other | downstream | 165962 | 16388697 ~ 16393682 (+) | False | LOC120554234 |
| XR_005638334.1 | other | downstream | 165962 | 16388697 ~ 16393682 (+) | False | LOC120554234 |
| XR_005638336.1 | other | downstream | 165962 | 16388697 ~ 16393682 (+) | False | LOC120554234 |
| unassigned_transcript_1646 | other | downstream | 279337 | 16502072 ~ 16502153 (+) | True | trnas-uga_33 |
