Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU319792 |
| length | 452 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G235625 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053135.1 |
| NCBI id | CM020932.1 |
| chromosome length | 21835524 |
| location | 17815715 ~ 17828471 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0099080 | supramolecular complex | cellular_component |
| GO:0099081 | supramolecular polymer | cellular_component |
| GO:0043292 | contractile fiber | cellular_component |
| GO:0044449 | obsolete contractile fiber part | cellular_component |
| GO:0036379 | myofilament | cellular_component |
| GO:0005861 | troponin complex | cellular_component |
| GO:0005865 | striated muscle thin filament | cellular_component |
| GO:0015629 | actin cytoskeleton | cellular_component |
| GO:0099512 | supramolecular fiber | cellular_component |
| GO:0030016 | myofibril | cellular_component |
| GO:0030017 | sarcomere | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU319775 | lncRNA | upstream | 70562 | 17742792 ~ 17745153 (+) | True | G235609 |
| TU319786 | lncRNA | upstream | 82935 | 17729469 ~ 17732780 (+) | True | G235619 |
| TU319780 | lncRNA | upstream | 88622 | 17722096 ~ 17727093 (+) | True | G235614 |
| TU319752 | lncRNA | upstream | 273554 | 17512726 ~ 17542161 (+) | True | G235589 |
| TU319750 | lncRNA | upstream | 306020 | 17509493 ~ 17509695 (+) | True | G235587 |
| TU319797 | lncRNA | downstream | 8599 | 17837070 ~ 17838244 (+) | True | G235630 |
| TU319883 | lncRNA | downstream | 63119 | 17891590 ~ 17902611 (+) | True | G235703 |
| TU319877 | lncRNA | downstream | 106765 | 17935236 ~ 17938311 (+) | False | als2b |
| TU319878 | lncRNA | downstream | 110623 | 17939094 ~ 17940272 (+) | True | G235699 |
| TU319887 | lncRNA | downstream | 114349 | 17942820 ~ 17943107 (+) | True | G235707 |
| XM_039792931.1 | mRNA | upstream | 7962 | 17775532 ~ 17807753 (+) | True | LOC120554200 |
| XM_039793026.1 | mRNA | upstream | 451650 | 17357447 ~ 17364065 (+) | True | LOC120554248 |
| XM_039792945.1 | mRNA | upstream | 472686 | 17340047 ~ 17343029 (+) | True | LOC120554209 |
| XM_039792988.1 | mRNA | upstream | 508777 | 17289184 ~ 17306938 (+) | True | LOC120554229 |
| XM_039792950.1 | mRNA | upstream | 547418 | 17236994 ~ 17268297 (+) | False | LOC120554211 |
| XM_039793052.1 | mRNA | downstream | 7423 | 17835894 ~ 17836902 (+) | True | LOC120554264 |
| XM_039792923.1 | mRNA | downstream | 53994 | 17882465 ~ 17935473 (+) | True | als2b |
| XM_039792924.1 | mRNA | downstream | 53994 | 17882465 ~ 17935473 (+) | False | als2b |
| XM_039792925.1 | mRNA | downstream | 53994 | 17882465 ~ 17935473 (+) | False | als2b |
| XM_039792926.1 | mRNA | downstream | 53994 | 17882465 ~ 17935473 (+) | False | als2b |
| unassigned_transcript_1702 | other | upstream | 710502 | 17105141 ~ 17105213 (+) | True | trnat-cgu_30 |
| unassigned_transcript_1701 | other | upstream | 711074 | 17104568 ~ 17104641 (+) | True | trnat-agu_66 |
| unassigned_transcript_1700 | other | upstream | 741632 | 17074011 ~ 17074083 (+) | True | trnat-cgu_29 |
| unassigned_transcript_1699 | other | upstream | 741990 | 17073653 ~ 17073725 (+) | True | trnat-cgu_28 |
| unassigned_transcript_1698 | other | upstream | 742595 | 17073048 ~ 17073120 (+) | True | trnat-ugu_47 |
| XR_005638333.1 | other | downstream | 124668 | 17953139 ~ 17960562 (+) | True | LOC120554216 |
| TU319966 | other | downstream | 338815 | 18167286 ~ 18171954 (+) | True | G235775 |
| TU319969 | other | downstream | 348354 | 18176825 ~ 18181812 (+) | True | G235778 |
| TU320432 | other | downstream | 2168328 | 19996799 ~ 19997667 (+) | True | G236162 |
| XR_005638373.1 | other | downstream | 2379858 | 20208329 ~ 20233795 (+) | False | prkx |
