RNA id: TU320357



Basic Information


Item Value
RNA id TU320357
length 650
lncRNA type inter_gene
GC content 0.52
exon number 8
gene id G236094
representative False

Chromosome Information


Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 19663910 ~ 19667992 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ccactacctgtacactgtcctgtgtctctctgtccctcgtTCTGCCCTCCTCCCTCAGCCGGTTGCACACCTGAGTGTAATCAGTGCTCAGGTAGAGTGGGGGAGGTGATAAGAATGCAGAGAGTGAAGGGACAGAGGCACATGGAGAGCACACCAGCAGCACACTAGTGAGGAGTTTCCTCCCCAGCAGGATTAGTTTACCCTTTGAAAGTAATTACGGGGGAGACATGGGGAAACGGGGGGAGCGACGGTCCACTGCGAGGCCGTAACACCGATCATATCGCCAACCTGGATCTACCAGCACCTACCTGGAACCTTCCAAAGCTGCTGTTGGAATGGCTCGTAGGTGGTGCTTGTCGACACTGCCACCTAAAGACAGCCGCTACAGCCTCCCATTTCACCAAAAAGCATCGGAGATATGCTATATATTATAAGGACGATGGAGAGGGTGAAGAGACTGCCCGTTGACAATCACCTGCACAGGGCGGGGGAGGATGGTGCCTCCTGTAAACGGAGACGGCGGCAGAAAGAGaGTGGATGAGCTGCTGGCTCCTCACACCTACCAAGACCACCTGGCTGGAGTGGAGAATCTGGAGAGATttgttttttccattttctgtttattttaataaaagtgtGAAACTCTTGAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU320304 lncRNA downstream 28904 19634730 ~ 19635006 (-) True G236055
TU320303 lncRNA downstream 29555 19634104 ~ 19634355 (-) True G236054
TU320302 lncRNA downstream 29951 19633378 ~ 19633959 (-) True G236053
TU320255 lncRNA downstream 55557 19607629 ~ 19608353 (-) True G236015
TU320272 lncRNA downstream 77187 19584193 ~ 19586723 (-) True G236032
TU320367 lncRNA upstream 28476 19696468 ~ 19699078 (-) True G236100
TU320370 lncRNA upstream 52640 19720632 ~ 19722905 (-) True G236103
TU320422 lncRNA upstream 205185 19873177 ~ 19873387 (-) True G236152
TU320425 lncRNA upstream 245317 19913309 ~ 19913970 (-) True G236155
TU320426 lncRNA upstream 309830 19977822 ~ 19978682 (-) True G236156
XM_039792553.1 mRNA downstream 9598 19622102 ~ 19654312 (-) True aox6
XM_039793147.1 mRNA downstream 42259 19608622 ~ 19621651 (-) True bzw1a
XM_039793267.1 mRNA downstream 82652 19551436 ~ 19581258 (-) False kynu
XM_039793144.1 mRNA upstream 81079 19749071 ~ 19755969 (-) False pnpla4
XM_039793143.1 mRNA upstream 81079 19749071 ~ 19755962 (-) False pnpla4
XM_039793142.1 mRNA upstream 81079 19749071 ~ 19755962 (-) True pnpla4
XM_039792919.1 mRNA upstream 707601 20375593 ~ 20380492 (-) False dhrsx
XM_039792917.1 mRNA upstream 707601 20375593 ~ 20380492 (-) False dhrsx
TU319844 other downstream 1918710 17734731 ~ 17745200 (-) False s100b
TU319472 other downstream 2560393 17064302 ~ 17103517 (-) True G235350
unassigned_transcript_1690 other downstream 2755492 16908345 ~ 16908418 (-) True trnat-agu_62
unassigned_transcript_1689 other downstream 2756088 16907750 ~ 16907822 (-) True trnat-cgu_24
unassigned_transcript_1688 other downstream 2756425 16907413 ~ 16907485 (-) True trnat-cgu_23
TU320378 other upstream 63327 19731319 ~ 19732537 (-) True G236111
TU320553 other upstream 699349 20367341 ~ 20368433 (-) True G236277
TU320640 other upstream 1058411 20726403 ~ 20728427 (-) True G236340
TU320641 other upstream 1058538 20726530 ~ 20728427 (-) False G236340
TU320656 other upstream 1092716 20760708 ~ 20760992 (-) True G236349

Expression Profile