RNA id: TU320603



Basic Information


Item Value
RNA id TU320603
length 269
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G236311
representative True

Chromosome Information


Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 20555715 ~ 20555983 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gctaaatagtctcaggaaggaacttgttttggtggaacatgtgtacgttcaaaagtagttttagtcgtgcaacagaaaactctgattggacagatagtctagctagctgtctggatttaccctgcagagatctgaggagcagttaaccatagtcctcacaaatccaccggaggttagaacgccaacccacagacagacgaaggggacggacatccggcctaaatgagtcaCATCCGGCAGCAATGGATCAATCCTGTAAATGAATggcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU320602 lncRNA downstream 15016 20540455 ~ 20540699 (-) True G236310
TU320601 lncRNA downstream 17601 20537901 ~ 20538114 (-) True G236309
TU320595 lncRNA downstream 44639 20509227 ~ 20511076 (-) True G236303
TU320577 lncRNA downstream 75396 20479155 ~ 20480319 (-) True G236294
TU320575 lncRNA downstream 76677 20477186 ~ 20479038 (-) True G236293
TU320621 lncRNA upstream 77895 20633878 ~ 20635879 (-) True G236326
TU320633 lncRNA upstream 121071 20677054 ~ 20677301 (-) True G236335
TU320650 lncRNA upstream 196626 20752609 ~ 20753023 (-) False G236347
TU320652 lncRNA upstream 196626 20752609 ~ 20753023 (-) False G236347
TU320653 lncRNA upstream 196626 20752609 ~ 20753023 (-) True G236347
XM_039793653.1 mRNA downstream 99652 20442981 ~ 20456063 (-) True LOC120554635
XM_039792919.1 mRNA downstream 175223 20375593 ~ 20380492 (-) False dhrsx
XM_039793228.1 mRNA upstream 238363 20794346 ~ 20802270 (-) True LOC120554361
XM_039793230.1 mRNA upstream 238363 20794346 ~ 20802205 (-) False LOC120554361
XM_039793229.1 mRNA upstream 238363 20794346 ~ 20802202 (-) False LOC120554361
XM_039792558.1 mRNA upstream 289318 20845301 ~ 20850464 (-) True rgn
XM_039793201.1 mRNA upstream 297582 20853565 ~ 20867800 (-) True vps16
TU320553 other downstream 187282 20367341 ~ 20368433 (-) True G236277
TU320378 other downstream 823178 19731319 ~ 19732537 (-) True G236111
TU319844 other downstream 2810515 17734731 ~ 17745200 (-) False s100b
TU319472 other downstream 3452198 17064302 ~ 17103517 (-) True G235350
unassigned_transcript_1690 other downstream 3647297 16908345 ~ 16908418 (-) True trnat-agu_62
TU320640 other upstream 170420 20726403 ~ 20728427 (-) True G236340
TU320641 other upstream 170547 20726530 ~ 20728427 (-) False G236340
TU320656 other upstream 204725 20760708 ~ 20760992 (-) True G236349
TU321082 other upstream 287509 20843492 ~ 20853383 (-) False rgn
TU321084 other upstream 287509 20843492 ~ 20853383 (-) False rgn

Expression Profile