RNA id: TU320690


Basic Information

Item Value
RNA id TU320690
length 420
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G236364
representative False

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 20800848 ~ 20871610 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgtatgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttatgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU320708 lncRNA upstream 3150 20866678 ~ 20867801 (+) True G236377
TU320685 lncRNA upstream 4540 20865514 ~ 20866411 (+) True G236360
TU320666 lncRNA upstream 29173 20769476 ~ 20841778 (+) False fmnl2b
TU320709 lncRNA downstream 672 20872282 ~ 20873613 (+) True G236378
TU320684 lncRNA downstream 6680 20878290 ~ 20878970 (+) True G236359
TU320715 lncRNA downstream 21309 20892919 ~ 20920763 (+) True G236383
TU320723 lncRNA downstream 27408 20899018 ~ 20941457 (+) True G236387
TU320724 lncRNA downstream 29376 20900986 ~ 20931759 (+) False G236388
XM_039793231.1 mRNA upstream 38288 20802267 ~ 20832663 (+) True fmnl2b
XM_039792557.1 mRNA upstream 163416 20706392 ~ 20707535 (+) True LOC120554009
XM_039792556.1 mRNA upstream 176340 20692960 ~ 20694611 (+) True LOC120554008
XM_039793639.1 mRNA upstream 235029 20595095 ~ 20635922 (+) True LOC120554627
XM_039793731.1 mRNA upstream 361037 20487667 ~ 20509914 (+) True LOC120554724
XM_039793203.1 mRNA downstream 4821 20876431 ~ 20886020 (+) True cavin2b
XM_039793634.1 mRNA downstream 16359 20887969 ~ 20889752 (+) True ebpl
XM_039793685.1 mRNA downstream 80542 20952152 ~ 20956272 (+) True eef1b2
XM_039793673.1 mRNA downstream 85339 20956949 ~ 20964585 (+) True zdbf2
XM_039793674.1 mRNA downstream 85339 20956949 ~ 20964585 (+) False zdbf2
TU320664 other upstream 49227 20815736 ~ 20821724 (+) False fmnl2b
XR_005638570.1 other upstream 361006 20487667 ~ 20509945 (+) False LOC120554724
TU320542 other upstream 473632 20383386 ~ 20397319 (+) False cd99
XR_005638373.1 other upstream 637156 20208329 ~ 20233795 (+) False prkx
TU320432 other upstream 873284 19996799 ~ 19997667 (+) True G236162
TU320732 other downstream 41045 20912655 ~ 20916777 (+) True G236394
TU320869 other downstream 430716 21302326 ~ 21361235 (+) False G236467
TU320853 other downstream 536317 21407927 ~ 21422915 (+) False G236461
TU320855 other downstream 536317 21407927 ~ 21422915 (+) True G236461
TU320854 other downstream 539202 21410812 ~ 21422915 (+) False G236461

Expression Profile