RNA id: TU320708


Basic Information

Item Value
RNA id TU320708
length 231
lncRNA type inter_gene
GC content 0.47
exon number 2
gene id G236377
representative True

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 20866678 ~ 20867801 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tatagtgtgtatagtgtgtataaGGATGCTGGGTgtgtgtatatagtgtgtataaggatactgagtgtgtgtatatagtgtgtatagtgtgtataaGGATactgggtgtgtgtgagaggcagtccgactcctctctctctgacagcGTTCAGGACTCTGAGTTCTCTGCAGGTCGACACGAACGCATCAGGACTGAAGTCAGTCAGGAAACACTTCCCAAAGGAGGCCgcc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU320685 lncRNA upstream 267 20865514 ~ 20866411 (+) True G236360
TU320666 lncRNA upstream 24900 20769476 ~ 20841778 (+) False fmnl2b
TU320662 lncRNA upstream 24900 20799398 ~ 20841778 (+) False fmnl2b
TU320673 lncRNA upstream 28868 20786949 ~ 20837810 (+) True G236355
TU320686 lncRNA upstream 71278 20793466 ~ 20795400 (+) True G236361
TU320710 lncRNA downstream 2865 20870666 ~ 20873613 (+) False G236378
TU320711 lncRNA downstream 3045 20870846 ~ 20873130 (+) True G236379
TU320690 lncRNA downstream 3150 20870951 ~ 20871610 (+) False G236364
TU320689 lncRNA downstream 3197 20870998 ~ 20871610 (+) True G236364
TU320692 lncRNA downstream 3339 20871140 ~ 20871610 (+) False G236364
XM_039793231.1 mRNA upstream 34015 20802267 ~ 20832663 (+) True fmnl2b
XM_039792557.1 mRNA upstream 159143 20706392 ~ 20707535 (+) True LOC120554009
XM_039792556.1 mRNA upstream 172067 20692960 ~ 20694611 (+) True LOC120554008
XM_039793639.1 mRNA upstream 230756 20595095 ~ 20635922 (+) True LOC120554627
XM_039793731.1 mRNA upstream 356764 20487667 ~ 20509914 (+) True LOC120554724
XM_039793203.1 mRNA downstream 8630 20876431 ~ 20886020 (+) True cavin2b
XM_039793634.1 mRNA downstream 20168 20887969 ~ 20889752 (+) True ebpl
XM_039793685.1 mRNA downstream 84351 20952152 ~ 20956272 (+) True eef1b2
XM_039793673.1 mRNA downstream 89148 20956949 ~ 20964585 (+) True zdbf2
XM_039793674.1 mRNA downstream 89148 20956949 ~ 20964585 (+) False zdbf2
TU320664 other upstream 44954 20815736 ~ 20821724 (+) False fmnl2b
XR_005638570.1 other upstream 356733 20487667 ~ 20509945 (+) False LOC120554724
TU320542 other upstream 469359 20383386 ~ 20397319 (+) False cd99
XR_005638373.1 other upstream 632883 20208329 ~ 20233795 (+) False prkx
TU320432 other upstream 869011 19996799 ~ 19997667 (+) True G236162
TU320732 other downstream 44854 20912655 ~ 20916777 (+) True G236394
TU320869 other downstream 434525 21302326 ~ 21361235 (+) False G236467
TU320853 other downstream 540126 21407927 ~ 21422915 (+) False G236461
TU320855 other downstream 540126 21407927 ~ 21422915 (+) True G236461
TU320854 other downstream 543011 21410812 ~ 21422915 (+) False G236461

Expression Profile