RNA id: TU320749


Basic Information

Item Value
RNA id TU320749
length 616
lncRNA type inter_gene
GC content 0.56
exon number 2
gene id G236407
representative True

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 20966396 ~ 20967733 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ctgtctgtctctctgtccttctgtctgtctgcagctctGTCTTCAGTGTCTCCACGGTCTCGTGCAGCAGCTCCTCTAGACTCCATGTCCCAGAATCCTCTGCTTCAGCCACACAGCTGCTGTCCTCTCCTTCCTGTAGCTCCACCCCTTCTGCCTGTAGCTCCgccccctcttcctctccacaGGGGGAGTCATGTGACGGAGACACGTCCCGGTGCATCGTGGGAGATGGAGTTTGTAGTTCTTCCTCGCTCCACTCGTCCTCTGTCTTCAgaaactcttcttcttcttctgtgtttctctcaGAGTCTGAAGTCAGCGTGAAGGTTTCTCTCTGCGTGGTAGCCATGGTCACCGTGTCCTCCGTGGTAGCCATGGTCACCGTGTCCTCCGTGGTCGCCATGGTCACCGTGTTGGTGCTCTGTGGCGTGTTGTCGGCGTGATGTTGAGCCTCCATCTTGTTCAGAGCCTGCAGACAATCAGAAAGAGAAACTCAAGGAGACAAGTCAACTACAACTCCCAGGCGTTTCCATGGTAACCTCCATGTCCGAGCACCTGTCCTCCAGGATGCCCTGCTCTGATTGGACGGTGAGCCGAAacgcctgcagctgctgct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU320747 lncRNA upstream 649 20962588 ~ 20965747 (+) True G236405
TU320746 lncRNA upstream 8640 20956967 ~ 20957756 (+) False zdbf2
TU320723 lncRNA upstream 24939 20899018 ~ 20941457 (+) True G236387
TU320724 lncRNA upstream 34637 20900986 ~ 20931759 (+) False G236388
TU320726 lncRNA upstream 34637 20900986 ~ 20931759 (+) True G236388
TU320752 lncRNA downstream 8339 20976072 ~ 20978453 (+) False LOC120554011
TU320755 lncRNA downstream 12174 20979907 ~ 21070444 (+) True LOC120554011
TU320756 lncRNA downstream 12174 20979907 ~ 21077796 (+) False LOC120554011
TU320761 lncRNA downstream 12833 20980566 ~ 20988411 (+) False G236413
TU320759 lncRNA downstream 13377 20981110 ~ 20988411 (+) False G236413
XM_039793673.1 mRNA upstream 1811 20956949 ~ 20964585 (+) True zdbf2
XM_039793674.1 mRNA upstream 1811 20956949 ~ 20964585 (+) False zdbf2
XM_039793685.1 mRNA upstream 10124 20952152 ~ 20956272 (+) True eef1b2
XM_039793634.1 mRNA upstream 76644 20887969 ~ 20889752 (+) True ebpl
XM_039793203.1 mRNA upstream 80376 20876431 ~ 20886020 (+) True cavin2b
XM_039792559.1 mRNA downstream 10672 20978405 ~ 21070422 (+) False LOC120554011
XM_039793675.1 mRNA downstream 44761 21012494 ~ 21026525 (+) True LOC120554650
XM_039793660.1 mRNA downstream 59319 21027052 ~ 21047316 (+) True LOC120554642
XM_039793661.1 mRNA downstream 59319 21027052 ~ 21047316 (+) False LOC120554642
XM_039793662.1 mRNA downstream 59319 21027052 ~ 21047316 (+) False LOC120554642
TU320732 other upstream 49619 20912655 ~ 20916777 (+) True G236394
TU320664 other upstream 144672 20815736 ~ 20821724 (+) False fmnl2b
XR_005638570.1 other upstream 456451 20487667 ~ 20509945 (+) False LOC120554724
TU320542 other upstream 569077 20383386 ~ 20397319 (+) False cd99
XR_005638373.1 other upstream 732601 20208329 ~ 20233795 (+) False prkx
TU320869 other downstream 334593 21302326 ~ 21361235 (+) False G236467
TU320853 other downstream 440194 21407927 ~ 21422915 (+) False G236461
TU320855 other downstream 440194 21407927 ~ 21422915 (+) True G236461
TU320854 other downstream 443079 21410812 ~ 21422915 (+) False G236461
TU320856 other downstream 446504 21414237 ~ 21422915 (+) False G236461

Expression Profile