RNA id: TU320882


Basic Information

Item Value
RNA id TU320882
length 263
lncRNA type sense_over
GC content 0.49
exon number 2
gene id G236478
representative True

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 21605133 ~ 21674674 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acacacacacacacacacaaagagacacacacacacacacacacacacacacacacacacacagacacagagacacacacacagacacacacacacacacacacacacacagagacacagagacacacacacacacacacacacacacacacacacacacacacagagacacacagacacacacacacacacacacacacacacacacacacacacacacacacagagacacacagacacacacacacacacacacacacaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU320875 lncRNA upstream 30311 21573674 ~ 21574822 (+) True G236471
TU320885 lncRNA upstream 35985 21511535 ~ 21569148 (+) True G236481
TU320931 lncRNA upstream 74453 21526536 ~ 21530680 (+) True G236520
TU320916 lncRNA upstream 79598 21485854 ~ 21525535 (+) True G236506
TU320917 lncRNA upstream 113401 21490294 ~ 21491732 (+) True G236507
TU320879 lncRNA downstream 17181 21691855 ~ 21693173 (+) True G236475
TU320847 lncRNA downstream 50718 21725392 ~ 21758600 (+) True G236460
TU320877 lncRNA downstream 59863 21734537 ~ 21738932 (+) True G236473
XM_039793684.1 mRNA upstream 97 21603492 ~ 21605036 (+) True LOC120554659
XM_039793682.1 mRNA upstream 212723 21372615 ~ 21392410 (+) True cdk15
XM_039793683.1 mRNA upstream 212723 21372616 ~ 21392410 (+) False cdk15
XM_039793688.1 mRNA upstream 233229 21367445 ~ 21371904 (+) True dph3
XM_039793687.1 mRNA upstream 312910 21289363 ~ 21292223 (+) True LOC120554662
TU320853 other upstream 182218 21407927 ~ 21422915 (+) False G236461
TU320855 other upstream 182218 21407927 ~ 21422915 (+) True G236461
TU320854 other upstream 182218 21410812 ~ 21422915 (+) False G236461
TU320856 other upstream 182218 21414237 ~ 21422915 (+) False G236461
TU320869 other upstream 243898 21302326 ~ 21361235 (+) False G236467

Expression Profile