RNA id: TU320995



Basic Information


Item Value
RNA id TU320995
length 578
RNA type TUCP
GC content 0.54
exon number 5
gene id arl11
representative False

Chromosome Information


Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 20940988 ~ 20951865 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TGGCGTTAGTGAAACTGAACAGCTGAGTTTCAGTCATAAACACACAGGCGAAGAAGAAGATGGGACACGCTCAGAGCTCTTCTCCGCAGgtgatcTTGATGGGTTTGGACTCTGCTGGAAAGACGACTCTGTTGGCCCAACTGCTGACAGGACAGGTGATGGAAACGTCTCCGACCATCGGCTTCAACGTGGGAACTCTGAATCTGGACAAGAAGACGTCTCTGACTGTTTGGGACGTCGGAGGACAGAAGAGTATGAGAGACAACTGGAGTTACTACCTTGATGACTGCCAGGCTCTGGTGTTCGTGGTGGACAGCAGTGACCCGGCCCGGCTGCCCGAGGCCCAGAAGGTTCTGAAGAAAGTTCTGAGTGAGAAGAAGCTGGAAGGAGTTCCTCTGATGGTTCTGGCCAACAAGAACGACCTGCCCAACGCCATGAACATCCAACAGaTCTCCACCCAGCTGTTCCTCCCCCAGTACGAGGACCGGCGTTGGGAGATCCAGGCCTGCAGCGGTCTGAAGGGTCTGGGCCTCCAGCAGGCCTTCACCTCCATCAACAAACTCATCAGACACAACAGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005638545.1 lncRNA downstream 13863 20920580 ~ 20927156 (-) True LOC120554667
TU321044 lncRNA downstream 23011 20859654 ~ 20918008 (-) True G236610
TU321063 lncRNA downstream 31008 20906215 ~ 20910011 (-) False LOC120554644
TU321093 lncRNA downstream 44887 20894240 ~ 20896132 (-) True G236649
TU320972 lncRNA downstream 54743 20845651 ~ 20886276 (-) False G236558
TU321058 lncRNA upstream 6634 20958314 ~ 20988474 (-) True G236624
TU321103 lncRNA upstream 36838 20988518 ~ 20989800 (-) True G236659
TU321104 lncRNA upstream 36838 20988518 ~ 20989800 (-) False G236659
TU321108 lncRNA upstream 78257 21029937 ~ 21030262 (-) True G236662
TU321122 lncRNA upstream 99827 21051507 ~ 21052073 (-) True G236673
XM_039793665.1 mRNA downstream 20521 20892914 ~ 20920498 (-) True LOC120554644
XM_039793201.1 mRNA downstream 73219 20853565 ~ 20867800 (-) True vps16
XM_039793202.1 mRNA downstream 73219 20854791 ~ 20867800 (-) False vps16
XM_039792558.1 mRNA downstream 90555 20845301 ~ 20850464 (-) True rgn
XM_039793228.1 mRNA downstream 138749 20794346 ~ 20802270 (-) True LOC120554361
XM_039793679.1 mRNA upstream 14258 20965938 ~ 21075255 (-) False dytn
XM_039793677.1 mRNA upstream 14258 20965938 ~ 21075255 (-) False dytn
XM_039793678.1 mRNA upstream 14258 20965938 ~ 21075255 (-) True dytn
XM_039793680.1 mRNA upstream 39210 20990890 ~ 21003269 (-) True ftcd
XM_039793681.1 mRNA upstream 39210 20990890 ~ 21001827 (-) False ftcd
TU321090 other downstream 77708 20862680 ~ 20863311 (-) True G236646
TU321082 other downstream 87636 20843492 ~ 20853383 (-) False rgn
TU321084 other downstream 87636 20843492 ~ 20853383 (-) False rgn
TU321086 other downstream 87636 20844051 ~ 20853383 (-) False rgn
TU321079 other downstream 87636 20845361 ~ 20853383 (-) False rgn
TU321138 other upstream 250235 21201915 ~ 21206810 (-) False LOC120554013
TU321003 other upstream 586822 21538502 ~ 21556981 (-) False LOC120554014
TU321228 other upstream 683168 21634848 ~ 21651877 (-) True LOC120554015
TU321045 other upstream 722012 21673692 ~ 21674838 (-) True G236611

Expression Profile