RNA id: XM_039793686.1


Basic Information

Item Value
RNA id XM_039793686.1
length 794
RNA type mRNA
GC content 0.50
exon number 5
gene id arl11
representative True

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 20940988 ~ 20951865 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TACTGacgtgtatgtatatatgtatatgtatatttcatGACGTCATGGAGATAAAGAAATAATATGAAAAATTACCAGTAACGTTGACCTGACTACAGGTGTATCGCCACTAGCAGAGAACCCGTCGGACCTGTCACACTGTCACGTGACGCGCTGTGATTGGACGCTGCTCTCCTATTGGCTGCTGGCGTTAGTGAAACTGAACAGCTGAGTTTCAGTCATAAACACACAGGCGAAGAAGAAGATGGGACACGCTCAGAGCTCTTCTCCGCAGgtgatcTTGATGGGTTTGGACTCTGCTGGAAAGACGACTCTGTTGGCCCAACTGCTGACAGGACAGGTGATGGAAACGTCTCCGACCATCGGCTTCAACGTGGGAACTCTGAATCTGGACAAGAAGACGTCTCTGACTGTTTGGGACGTCGGAGGACAGAAGAGTATGAGAGACAACTGGAGTTACTACCTTGATGACTGCCAGGCTCTGGTGTTCGTGGTGGACAGCAGTGACCCGGCCCGGCTGCCCGAGGCCCAGAAGGTTCTGAAGAAAGTTCTGAGTGAGAAGAAGCTGGAAGGAGTTCCTCTGATGGTTCTGGCCAACAAGAACGACCTGCCCAACGCCATGAACATCCAACAGaTCTCCACCCAGCTGTTCCTCCCCCAGTACGAGGACCGGCGTTGGGAGATCCAGGCCTGCAGCGGTCTGAAGGGTCTGGGCCTCCAGCAGGCCTTCACCTCCATCAACAAACTCATCAGACACAACAGACATCTTATATAATTATagataattatatata

Function

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0005525 GTP binding molecular_function

KEGG:

id description
K07959 ARL11; ADP-ribosylation factor-like protein 11

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005638545.1 lncRNA downstream 13832 20920580 ~ 20927156 (-) True LOC120554667
TU321044 lncRNA downstream 22980 20859654 ~ 20918008 (-) True G236610
TU321063 lncRNA downstream 30977 20906215 ~ 20910011 (-) False LOC120554644
TU321093 lncRNA downstream 44856 20894240 ~ 20896132 (-) True G236649
TU320972 lncRNA downstream 54712 20845651 ~ 20886276 (-) False G236558
TU321058 lncRNA upstream 6449 20958314 ~ 20988474 (-) True G236624
TU321103 lncRNA upstream 36653 20988518 ~ 20989800 (-) True G236659
TU321104 lncRNA upstream 36653 20988518 ~ 20989800 (-) False G236659
TU321108 lncRNA upstream 78072 21029937 ~ 21030262 (-) True G236662
TU321122 lncRNA upstream 99642 21051507 ~ 21052073 (-) True G236673
XM_039793665.1 mRNA downstream 20490 20892914 ~ 20920498 (-) True LOC120554644
XM_039793201.1 mRNA downstream 73188 20853565 ~ 20867800 (-) True vps16
XM_039793202.1 mRNA downstream 73188 20854791 ~ 20867800 (-) False vps16
XM_039792558.1 mRNA downstream 90524 20845301 ~ 20850464 (-) True rgn
XM_039793230.1 mRNA downstream 138783 20794346 ~ 20802205 (-) False LOC120554361
XM_039793679.1 mRNA upstream 14073 20965938 ~ 21075255 (-) False dytn
XM_039793677.1 mRNA upstream 14073 20965938 ~ 21075255 (-) False dytn
XM_039793678.1 mRNA upstream 14073 20965938 ~ 21075255 (-) True dytn
XM_039793680.1 mRNA upstream 39025 20990890 ~ 21003269 (-) True ftcd
XM_039793681.1 mRNA upstream 39025 20990890 ~ 21001827 (-) False ftcd
TU321090 other downstream 77677 20862680 ~ 20863311 (-) True G236646
TU321082 other downstream 87605 20843492 ~ 20853383 (-) False rgn
TU321138 other upstream 250050 21201915 ~ 21206810 (-) False LOC120554013
TU321003 other upstream 586637 21538502 ~ 21556981 (-) False LOC120554014
TU321228 other upstream 682983 21634848 ~ 21651877 (-) True LOC120554015
TU321045 other upstream 721827 21673692 ~ 21674838 (-) True G236611

Expression Profile