RNA id: TU321008


Basic Information

Item Value
RNA id TU321008
length 385
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G236578
representative True

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 21766476 ~ 21809098 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTGAttacttctttagtgaaaccaaagaagcaggaatctgcaggtttgaagaggttgtgttcatctttgatggtctggatgagtgtcgacttcctctggacttcctcaacactgagatcctgactgatgttacaaaGTCCAActcagtgggtgtgctgctgacaaacctcatcagggggaaactgcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctcctgagtgtgttgacatggtgacagaggtcagagggttcactgacccacagaaggaggagtacttcaggaagagattcagagatgaggagcaggccaacagaatcatctcccacatcaagacatcacgaagcctccatatcat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU321013 lncRNA downstream 38015 21725443 ~ 21728461 (-) True G236580
TU321050 lncRNA downstream 49624 21661828 ~ 21716852 (-) True G236616
TU321028 lncRNA downstream 98702 21643857 ~ 21667774 (-) True G236594
TU321233 lncRNA downstream 120868 21644465 ~ 21645608 (-) True G236750
TU321229 lncRNA downstream 125744 21638277 ~ 21640732 (-) True G236747
XR_005638553.1 lncRNA upstream 13187 21822285 ~ 21823393 (-) True LOC120554672
XM_039793671.1 mRNA downstream 41460 21700705 ~ 21725016 (-) True LOC120554648
XM_039793672.1 mRNA downstream 41460 21700706 ~ 21725016 (-) False LOC120554648
XM_039793670.1 mRNA downstream 41460 21700921 ~ 21725016 (-) False LOC120554648
XM_039792564.1 mRNA downstream 75388 21651966 ~ 21691088 (-) True LOC120554016
XM_039792563.1 mRNA downstream 114558 21641838 ~ 21651918 (-) False LOC120554015
TU321045 other downstream 91638 21673692 ~ 21674838 (-) True G236611
TU321228 other downstream 114599 21634848 ~ 21651877 (-) True LOC120554015
TU321003 other downstream 209495 21538502 ~ 21556981 (-) False LOC120554014
TU321138 other downstream 559666 21201915 ~ 21206810 (-) False LOC120554013
TU320995 other downstream 814796 20941019 ~ 20951680 (-) False arl11

Expression Profile