RNA id: TU321028



Basic Information


Item Value
RNA id TU321028
length 238
lncRNA type read_through
GC content 0.44
exon number 2
gene id G236594
representative True

Chromosome Information


Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 21643857 ~ 21667774 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


acacacagacacacacattcacacagacacattcacacacacacacatacacacagacacatacacacagacacagacacatacacacagacacatacacgacatacacacagacacagacacatacacacagacacatacacacatacacacacacacacacatacacacacacacacacacacacacatatacacacacacacacacacacacacacacacacacacacatataca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU321229 lncRNA downstream 3125 21638277 ~ 21640732 (-) True G236747
TU321002 lncRNA downstream 3981 21636233 ~ 21639876 (-) True G236574
TU321027 lncRNA downstream 10745 21631418 ~ 21633112 (-) True G236593
TU321021 lncRNA downstream 12661 21625938 ~ 21631196 (-) True G236587
TU321225 lncRNA downstream 20401 21622498 ~ 21623456 (-) True G236743
TU321013 lncRNA upstream 57669 21725443 ~ 21728461 (-) True G236580
TU321008 lncRNA upstream 98702 21766476 ~ 21809098 (-) True G236578
XR_005638558.1 lncRNA upstream 127056 21794830 ~ 21798662 (-) True LOC120554678
TU321039 lncRNA upstream 130980 21798754 ~ 21806413 (-) True G236605
XR_005638553.1 lncRNA upstream 154511 21822285 ~ 21823393 (-) True LOC120554672
XM_039792562.1 mRNA downstream 86836 21300281 ~ 21557021 (-) True LOC120554014
XM_039792561.1 mRNA downstream 401680 21201874 ~ 21242177 (-) True LOC120554013
XM_039793658.1 mRNA downstream 494494 21126894 ~ 21149363 (-) True LOC120554641
XM_039793659.1 mRNA downstream 498702 21126894 ~ 21145155 (-) False LOC120554641
XM_039793681.1 mRNA downstream 642030 20990890 ~ 21001827 (-) False ftcd
XM_039793671.1 mRNA upstream 32931 21700705 ~ 21725016 (-) True LOC120554648
XM_039793672.1 mRNA upstream 32932 21700706 ~ 21725016 (-) False LOC120554648
XM_039793670.1 mRNA upstream 33147 21700921 ~ 21725016 (-) False LOC120554648
TU321003 other downstream 86876 21538502 ~ 21556981 (-) False LOC120554014
TU321138 other downstream 437047 21201915 ~ 21206810 (-) False LOC120554013
TU320995 other downstream 692177 20941019 ~ 20951680 (-) False arl11
TU321090 other downstream 780546 20862680 ~ 20863311 (-) True G236646
TU321079 other downstream 790474 20845361 ~ 20853383 (-) False rgn
TU321045 other upstream 5918 21673692 ~ 21674838 (-) True G236611

Expression Profile