RNA id: TU321055



Basic Information


Item Value
RNA id TU321055
length 470
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G236621
representative True

Chromosome Information


Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 20871000 ~ 20871638 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


acacacacacacagagacacacacacacacacacacacacacacacacatacacacacacacacacacataaacacacacacacacacacacacacacacacacacacacacagacacacaaacacacacacacacacacacacacagacacacacacacagagacacacacacacacacacacacacacacacacagagacacacacacacacacacacagagacacacacacacacacacacacacacacacacacacagagacacacaaacacacacacacacacacacacacacacacacacacaaacacacacacacacacagacacacacacacacacacacagacacacacacacacacacacacacacacacagagacacacacacacatacacacacacacacacacacacagagacacacacacagacacacacacacacacacacacagagacacacac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU320980 lncRNA downstream 29255 20839612 ~ 20841745 (-) False G236560
TU320981 lncRNA downstream 29255 20839612 ~ 20841745 (-) True G236560
TU320982 lncRNA downstream 29255 20839612 ~ 20841745 (-) False G236560
TU320984 lncRNA downstream 29255 20839612 ~ 20841745 (-) False G236560
TU321078 lncRNA downstream 40264 20830357 ~ 20830736 (-) True G236644
TU320979 lncRNA upstream 9281 20880919 ~ 20882181 (-) True G236559
TU320971 lncRNA upstream 11627 20883265 ~ 20886276 (-) True G236558
TU321093 lncRNA upstream 22602 20894240 ~ 20896132 (-) True G236649
TU321063 lncRNA upstream 34577 20906215 ~ 20910011 (-) False LOC120554644
XR_005638545.1 lncRNA upstream 48942 20920580 ~ 20927156 (-) True LOC120554667
XM_039793201.1 mRNA downstream 3200 20853565 ~ 20867800 (-) True vps16
XM_039793202.1 mRNA downstream 3200 20854791 ~ 20867800 (-) False vps16
XM_039792558.1 mRNA downstream 20536 20845301 ~ 20850464 (-) True rgn
XM_039793228.1 mRNA downstream 68730 20794346 ~ 20802270 (-) True LOC120554361
XM_039793230.1 mRNA downstream 68795 20794346 ~ 20802205 (-) False LOC120554361
XM_039793665.1 mRNA upstream 21276 20892914 ~ 20920498 (-) True LOC120554644
XM_039793686.1 mRNA upstream 69350 20940988 ~ 20951865 (-) True arl11
XM_039793679.1 mRNA upstream 94300 20965938 ~ 21075255 (-) False dytn
XM_039793677.1 mRNA upstream 94300 20965938 ~ 21075255 (-) False dytn
XM_039793678.1 mRNA upstream 94300 20965938 ~ 21075255 (-) True dytn
TU321090 other downstream 7689 20862680 ~ 20863311 (-) True G236646
TU321082 other downstream 17617 20843492 ~ 20853383 (-) False rgn
TU321084 other downstream 17617 20843492 ~ 20853383 (-) False rgn
TU321086 other downstream 17617 20844051 ~ 20853383 (-) False rgn
TU321079 other downstream 17617 20845361 ~ 20853383 (-) False rgn
TU320995 other upstream 69381 20941019 ~ 20951680 (-) False arl11
TU321138 other upstream 330277 21201915 ~ 21206810 (-) False LOC120554013
TU321003 other upstream 666864 21538502 ~ 21556981 (-) False LOC120554014
TU321228 other upstream 763210 21634848 ~ 21651877 (-) True LOC120554015
TU321045 other upstream 802054 21673692 ~ 21674838 (-) True G236611

Expression Profile