RNA id: TU321062



Basic Information


Item Value
RNA id TU321062
length 280
lncRNA type intronic
GC content 0.50
exon number 2
gene id G236628
representative True

Chromosome Information


Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 21344701 ~ 21345183 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tgtgtgtgtgtctgcgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtctgtctgtctgtctgtctgtgtgtgtgtgtgtctgtctgtctgtctgtcttgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtctgtgtgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005638546.1 lncRNA downstream 19203 21324435 ~ 21325498 (-) True LOC120554668
TU321163 lncRNA downstream 97625 21213739 ~ 21247076 (-) False G236692
TU321165 lncRNA downstream 97625 21231868 ~ 21247076 (-) False G236692
TU321168 lncRNA downstream 110083 21217717 ~ 21234618 (-) True G236695
TU321170 lncRNA downstream 114434 21226798 ~ 21230267 (-) True G236697
XR_005638548.1 lncRNA upstream 9864 21355047 ~ 21357342 (-) True LOC120554669
TU321185 lncRNA upstream 27931 21373114 ~ 21373378 (-) True G236711
TU321052 lncRNA upstream 30254 21375437 ~ 21381005 (-) True G236618
TU321186 lncRNA upstream 30942 21376125 ~ 21376884 (-) True G236712
TU321189 lncRNA upstream 32196 21377379 ~ 21378004 (-) True G236713
XM_039792561.1 mRNA downstream 102524 21201874 ~ 21242177 (-) True LOC120554013
XM_039793658.1 mRNA downstream 195338 21126894 ~ 21149363 (-) True LOC120554641
XM_039793659.1 mRNA downstream 199546 21126894 ~ 21145155 (-) False LOC120554641
XM_039793680.1 mRNA downstream 341432 20990890 ~ 21003269 (-) True ftcd
XM_039792563.1 mRNA upstream 296655 21641838 ~ 21651918 (-) False LOC120554015
XM_039792564.1 mRNA upstream 306783 21651966 ~ 21691088 (-) True LOC120554016
XM_039793671.1 mRNA upstream 355522 21700705 ~ 21725016 (-) True LOC120554648
XM_039793672.1 mRNA upstream 355523 21700706 ~ 21725016 (-) False LOC120554648
XM_039793670.1 mRNA upstream 355738 21700921 ~ 21725016 (-) False LOC120554648
TU321138 other downstream 137891 21201915 ~ 21206810 (-) False LOC120554013
TU320995 other downstream 393021 20941019 ~ 20951680 (-) False arl11
TU321090 other downstream 481390 20862680 ~ 20863311 (-) True G236646
TU321086 other downstream 491318 20844051 ~ 20853383 (-) False rgn
TU321003 other upstream 193319 21538502 ~ 21556981 (-) False LOC120554014
TU321228 other upstream 289665 21634848 ~ 21651877 (-) True LOC120554015
TU321045 other upstream 328509 21673692 ~ 21674838 (-) True G236611

Expression Profile