RNA id: XM_039793675.1


Basic Information

Item Value
RNA id XM_039793675.1
length 2313
RNA type mRNA
GC content 0.53
exon number 15
gene id LOC120554650
representative True

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 21012494 ~ 21026525 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TGTAAAAACGGAGGTCGACCTCTGAACGGCATCTGTATCTGTCCGGATGAATGGACCGGAAAGACCTGCTCAGTAGCAAATTTCTGCAAAGCCAAGGAGATGATCGCCAACAACAGAGTATTCAACTTCCCACAAACACCCATCGGCTGGTACGCTTATTCTAAGGAAATCTGTCCACCAGGAACGAGTGGCGCGGGTAAACCCCAGGCTTCGACCAGATGTTCCAACAGGAACACGCCCCCAAGTTTCCAGGAGCCGCGCGAACTCCAGTGTGGACAGACCCTCACCGACATACAACAAAATCTGAACGGCTCAGCAGATTTAGAGACGCTGGCAGCGAGCGCTCAGATGCTGACGTCCCAACCTGAAAATCTGACGGCTGAAGAAGTGACGACGGCCGCTCAGATCGCCGACACGCTGCTGTCGTCTGAGAACGTCTCACAGAGCGTGAGGGAGGCAGCTGTAGCGACTGTCAGCCAGATTCTGAACACCAACCCGTCAGACAACATCCAGGAAAACAACGCTACTCTCAGGCTGACGCAGACCCTGTCCAGCCTGTCGGTGAACCTGAGTCTGATCTCCAATGATTCTAAGTTGGTTCAGCCAAACATCGTAGTCCAGTCGGCTCAGATCTCGGCGGCCGACACTCAGGGAGTCCAGTTCACTGCACTGTCAGGAACGTCGGGAAGTTTCGTTGCCGACCGCATCCAGCTGGACACCAACACGTCGGCCATCGCCGTGGAAACCGGCTTTGTTGCAGACGCCGTCGTTTACCTCCAGTTCCCCCCAGgcgGTTCTGCCGGCCGTCTCCAGACTCCGTCCAACGTATCTGTGGGTTTCGTCCTCTACCAGAACGACCACTTCTTCCACTCGCGGCGCTACAGACGGCGCCGGGCCTCGGTCAGGGTCCTGTCGGCCAACGTCAGCGGTCTGGAGCCACAACAGGTCCAGATGCTCTTCAGACCAATGCTTCTGAACGGTACGTCTCTGTGGGACTTCTCGTGTGTTTTTTGGAACTACAGTTTGGAGGATTGGAGCGTGGCTGGCTGCTGGAAGGGAAACGCTTCAGACGGAGTCCTCCAATGTTTCTGCAACCACACAACCAACTTCGCTGCTCTCTGGtccTTCAGAGAGAATTATAAATATGTAGAAGCGCTGGATGTGATTTCTATAGTTGGactttctttctccatcctGGGTTTGGTTGTTACGATAATTCACCACATTACAGACAACTTTAAGAGAAACAGTGGCGACTGGAAGAACTACAGGAACTCCCAGCTTGCTTTGCAAAGTACATGTTTCAGCCTGCTGGCCTTCATCATCACCTTCCTCTCTGGCGTCACAAACCGGCGACAGGACGCTGGCGATGACGACGCGTTGCTCGACACCGAGACCAACGGCGTCCTGGACTCTGACGAACACGTGGCGGCAGACAGCGGCCCATGTTCGGGGGTGACGGCGCTGCTTCACTTCTTCCTGTTAGCTACGTTCATGTGGAACAGCATGTACGCCACACAGCTGGTGCTGCTCGTCCGCAAGATGCGCCAGAACCTGCCACCATACTGGACGAAGCTCAGCACCACCATAGGATGGGGAGTCCCAGCTGTCGTCATGGCGATCACACTGGGAATCACCTACAGGGTGGACGACCCTCTAGGATATAGACAGGAAgaattTTGCTGGCTGGCAGCGCTGGATAAATCCAAAGATTTTGACTTTGGGAAGCCGatgttttggggttttctgCTTCCTATCGGTTTGATTCTGATCTACAACATCGTTCTGTTGGTTCTGGTCTCTCAGACCACCTGCAGGACCGACCCCGCCCTCAAGAGCAGTAATCCTCGGTCCGTGTGGAGGAACTTTCTGATCAGTTTCTCTCTGGCTGTGTTACTCGGTTTGTCCTGGACCCTGGGTTACCTGGTGCTGGTTACCACGGGATACGCCCACCTGGTGCTCAGCATCCTCTTCTGCCTCTGCACCACCACACAGgGGCTCCAGATATTCGTCCTGTTCACCGCCAGAAAGCCGAGCTTCAGAGCTGGCGTGTTGCAATTGGTTCAGACCATCTCGTCTGTCAACATCCAActcagagagttttcatataaTCTGCTGAGAGAATGGACTCACTCTACCGAGTCCTACAGAGAGCTGACAGtctagagactttttttttgggggggggggaaacacgGAGGAACCAGTTGCAGCAATTTCTGTCACACAATATATGACTATTGTtatgaaaatatgtattttttccCTTAAAATATGaaacttttattctgaaaatattttttattttttccc

Function

GO: NA

KEGG:

id description
K08464 ADGRG7, GPR128; adhesion G-protein coupled receptor G7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU320761 lncRNA upstream 24083 20980566 ~ 20988411 (+) False G236413
TU320759 lncRNA upstream 24083 20981110 ~ 20988411 (+) False G236413
TU320760 lncRNA upstream 24083 20981110 ~ 20988411 (+) True G236413
TU320763 lncRNA upstream 24083 20981110 ~ 20988411 (+) False G236413
TU320752 lncRNA upstream 34041 20976072 ~ 20978453 (+) False LOC120554011
TU320794 lncRNA downstream 125888 21152413 ~ 21233973 (+) True G236440
TU320802 lncRNA downstream 167078 21193603 ~ 21247124 (+) False G236446
TU320805 lncRNA downstream 170900 21197425 ~ 21203222 (+) False G236448
TU320806 lncRNA downstream 170900 21197425 ~ 21202606 (+) False G236448
TU320808 lncRNA downstream 170900 21197425 ~ 21203222 (+) False G236448
XM_039793673.1 mRNA upstream 47909 20956949 ~ 20964585 (+) True zdbf2
XM_039793674.1 mRNA upstream 47909 20956949 ~ 20964585 (+) False zdbf2
XM_039793685.1 mRNA upstream 56222 20952152 ~ 20956272 (+) True eef1b2
XM_039793634.1 mRNA upstream 122742 20887969 ~ 20889752 (+) True ebpl
XM_039793203.1 mRNA upstream 126474 20876431 ~ 20886020 (+) True cavin2b
XM_039793660.1 mRNA downstream 527 21027052 ~ 21047316 (+) True LOC120554642
XM_039793661.1 mRNA downstream 527 21027052 ~ 21047316 (+) False LOC120554642
XM_039793662.1 mRNA downstream 527 21027052 ~ 21047316 (+) False LOC120554642
XM_039793663.1 mRNA downstream 527 21027052 ~ 21044207 (+) False LOC120554642
XM_039793664.1 mRNA downstream 10572 21037097 ~ 21047316 (+) False LOC120554642
TU320732 other upstream 95717 20912655 ~ 20916777 (+) True G236394
TU320664 other upstream 190770 20815736 ~ 20821724 (+) False fmnl2b
XR_005638570.1 other upstream 502549 20487667 ~ 20509945 (+) False LOC120554724
TU320542 other upstream 615175 20383386 ~ 20397319 (+) False cd99
XR_005638373.1 other upstream 778699 20208329 ~ 20233795 (+) False prkx
TU320869 other downstream 275801 21302326 ~ 21361235 (+) False G236467
TU320853 other downstream 381402 21407927 ~ 21422915 (+) False G236461
TU320855 other downstream 381402 21407927 ~ 21422915 (+) True G236461
TU320854 other downstream 384287 21410812 ~ 21422915 (+) False G236461
TU320856 other downstream 387712 21414237 ~ 21422915 (+) False G236461

Expression Profile