RNA id: XM_039793676.1


Basic Information

Item Value
RNA id XM_039793676.1
length 2217
RNA type mRNA
GC content 0.54
exon number 15
gene id LOC120554651
representative True

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 21098583 ~ 21120770 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cctactactactgctcttcctcctgctactactgctactgctcctcctactactactactcgtCCTCCTACTACTACAACTCCTACTACTACTACGACTACTCCCCCTCCTCTGGTTTGCTATAACGGAGGTAGACCTCTGAATGGCGTCTGTATCTGTCCGGACGACTGGACTGGAAAGACCTGCTCAGTAGAGAATTTTTGCAAAGCCAAGATGATAGCCCAGAACAACAGAGTATTCAACTTCCCACAAACACCCGTTGGCCGGTACGCTTATTCTAATGAAACCTGTCAACCACGAACGAGTGGCGCGGGTAAACCCCAGGCTTTGACCAGATGTTCCAACAGGAAAATACCCCCGAGTTTCCAGGAGCCGCGCGTCCTCCAGTGTGACCTGACGCTCACCAACATACAACAAAATCTGAACGGCTCGGCAGATTTAGAGACGCTGGCGGCGAGCGCTCAGATGCTGACGTCCCAACCTGAAGATCTGACGGCTGAAGAAGTGACGACGGCCGCTCAGATCGCCGACACGCTGCTGTCGTCTGAGAACGTCTCACAGAGCGTGAGGGAGTCAGCGGTAGCGACCGTCAGCCAGATTCTGAACGCTGACCCGCCAGACGACAACCAGGAAAACAGCGCTACTCACAACCTGACACAGACCCTGTCCAGCCTGTCGGTGAACCTGAGTTTGATCTCCAATGATTCTAAGATGGTTCAGCCAAACATCGTGGTCCAGTCGGCTCAGATCTCAGCAGCCGACACTCAGGGAGTCCAGTTCACTGCACTGTCAGGAACGTCGGAACGTTTTGGTGCCAACCGCATCCAGCTGGACACCAACACATCGGCTGTCGCCGTGGAAACCAACTTCACCGCCGACGCCGTCGTTTACCTCAAGTTCCCCACAGgcGGTGCGGATGGCCATCTCCAGACTCCGTCCAACGTGTCTGTGGGTTTCGTCCTCTACCAGAACGACCACTTCTTCCACTCGAAGCGCTACAGGCGGCGCCGGGCCTCCGTCAGGGTCCTGTCGGCCACCGTTGGCGGTCTGGAGCCGCAACAGGTCCAGATGCTCTTCAGACCAATGCTCCTGAACGGTACGTCTCTGTGGGACTTCTCGTGTGTTTTTTGGGACTACACTTTGGAGGATTGGAGCGCGGCTGGCTGCTGGAAGGGAAACGCTTCAGACGGAGTCCTCCAATGTTTCTGCAACCACACAACCAACTTCGCTGCTCTCTGGTCCTTCAGAGAGAATTATAAATATGCAGCGCTGGATAAAATTTCTATAGTTGGactttctttctccatcctGGGTTTGGTTGTTACGATAATTCACCACATTACGGACAAGGGCGAACGGAAGAAGAGTAGGAACTCCCAGCTTGCTTTGCTGAGTATATGGTTCAGCCTGCTGGCCTTCATCATCACCTTCCTCTCTGGCGTCACAAACACCAATGACAACGCGGTGCTCCACAATAAGACCAACGATGTCCCGCACTCTGACGAACACGTGGCAAAGAATGCCCGATGTTCGGCGGTGACGGCGCTGCTTCACTTCTTCCTGTTAGCTACCTTTACGTGGAACAGTGTGTACGCCACGCAGGAGGTGCTGCTCTTTCGCAAGATACACCACAAGCTGCCGCCATACTGGACGCCGCTCAGCGCCACCATAGGATGGGgAGTCCCAGCTGTCGTCATGGCGATCACACTGGCAATCGCCTACAGGATGGACAACCCTCTGGGATATAGACAGGAGGAATTTTGCTGGCTGGCAGCGCTGGATAAATCCAAACACTTTGACTATGGGAAGCCGATGTTTTGGGGTTTCGTGCTTCCTATTGGTTTGATTCTGATCTACAACATCGTCCTGTTGGTTCTGGTCTCTCGGTACGACAACTCCCTCAAGAGCATCAGGAAGTTACTGAACAGTTTCTCTCTGGCCGTGTTACTCGGTCTGTCCTGGACTCTGGGTTACCTGGTGCTGGTTACCGAGGGAACTGCCCACGAGGTGCTCAGCTACCTCTTCTGCATCGGCACCACCACACAGGGGCTCCTTATATTCGTCCTGTTCACCGCCATTAAGCCAAGCTTCAGAGGCCGCGTGTCACGATCCGTTCGGACCATCTCGTCTGTCAACATCCAACTCAAACAGTTTAAATATAATCTGCAGAGAGACTGGACCAGCTCTAACGAGTCCTACAGAGTCCGGATAGACTAA

Function

GO: NA

KEGG:

id description
K08464 ADGRG7, GPR128; adhesion G-protein coupled receptor G7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU320756 lncRNA upstream 20787 20979907 ~ 21077796 (+) False LOC120554011
TU320755 lncRNA upstream 28139 20979907 ~ 21070444 (+) True LOC120554011
TU320761 lncRNA upstream 110172 20980566 ~ 20988411 (+) False G236413
TU320759 lncRNA upstream 110172 20981110 ~ 20988411 (+) False G236413
TU320760 lncRNA upstream 110172 20981110 ~ 20988411 (+) True G236413
TU320794 lncRNA downstream 31643 21152413 ~ 21233973 (+) True G236440
TU320802 lncRNA downstream 72833 21193603 ~ 21247124 (+) False G236446
TU320805 lncRNA downstream 76655 21197425 ~ 21203222 (+) False G236448
TU320806 lncRNA downstream 76655 21197425 ~ 21202606 (+) False G236448
TU320808 lncRNA downstream 76655 21197425 ~ 21203222 (+) False G236448
XM_039792559.1 mRNA upstream 28161 20978405 ~ 21070422 (+) False LOC120554011
XM_039793667.1 mRNA upstream 34666 21049514 ~ 21063917 (+) True LOC120554645
XM_039793669.1 mRNA upstream 34666 21049514 ~ 21063917 (+) False LOC120554645
XM_039793668.1 mRNA upstream 34666 21049514 ~ 21063917 (+) False LOC120554645
XM_039793660.1 mRNA upstream 51267 21027052 ~ 21047316 (+) True LOC120554642
XM_039792560.1 mRNA downstream 37191 21157961 ~ 21165554 (+) True LOC120554012
XM_039793690.1 mRNA downstream 45033 21165803 ~ 21191445 (+) True LOC120554666
XM_039793687.1 mRNA downstream 168593 21289363 ~ 21292223 (+) True LOC120554662
XM_039793688.1 mRNA downstream 246675 21367445 ~ 21371904 (+) True dph3
XM_039793682.1 mRNA downstream 251845 21372615 ~ 21392410 (+) True cdk15
TU320732 other upstream 181806 20912655 ~ 20916777 (+) True G236394
TU320664 other upstream 276859 20815736 ~ 20821724 (+) False fmnl2b
XR_005638570.1 other upstream 588638 20487667 ~ 20509945 (+) False LOC120554724
TU320542 other upstream 701264 20383386 ~ 20397319 (+) False cd99
XR_005638373.1 other upstream 864788 20208329 ~ 20233795 (+) False prkx
TU320869 other downstream 181556 21302326 ~ 21361235 (+) False G236467
TU320853 other downstream 287157 21407927 ~ 21422915 (+) False G236461
TU320855 other downstream 287157 21407927 ~ 21422915 (+) True G236461
TU320854 other downstream 290042 21410812 ~ 21422915 (+) False G236461
TU320856 other downstream 293467 21414237 ~ 21422915 (+) False G236461

Expression Profile