RNA id: XM_039793690.1


Basic Information

Item Value
RNA id XM_039793690.1
length 2432
RNA type mRNA
GC content 0.53
exon number 17
gene id LOC120554666
representative True

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 21165803 ~ 21191445 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ACCGTCAGCGGTCTGGAGCCGCAACAGGTCCAGATGTTCTTCAGACCAAAGTATTGGCATGGTACACAGCATGGTCTGGATCTGGACTTCTCGTGTGTTTTTTGGGACTACAGTTTGGAGGATTGGAGCGAGGCTGGCTGCTGGAAGGGAAAAGCTTCAAACGGATTACTCGAATGTTTCTGCAACCATACGGGCACCTTCGCTGCTCTCTGTGTGAAGAAACAGGTTTGCTATAACGGAGGACTTCTGAACGGCGTCTGTATCTGTCCAGATGAATGGACCGGAAAGAACTGCTCAGTAGAGAATTTCTGTGAAGCCCAGAACATGAGTGGATTAAACTTCCCACGAACACCTGTCAGCCGGTACGCTTATTCTAAGGAAATCTGTCCACCGAGAACGAGTGCCGCGGGTAAACCCCAGGCTTCAACCAGATGTTCCAAAGGGAACATATCTCCGAGTTTCCAGGAGCCGCCGCGCGTCCTCCAGTGTGACCTGACGCTCGCCGACATTCAACAAAATCTGAACGGCTCGGCAGATTTAGAGACGCTGGCGGCGAGCGCTCAGATCCTGACGTCCCAACCTGAAGATCTGACGGCTGAAGAAGTGACGATGGCCGCTCAGATCGCCGACACGCTGCTGTCGTCTGAGAACGTCTCACAGAGCGTGAGAGAGGCAGCTGTAGCGACTGTCAGCCAGATTCTGAACGCCGACCCGTCAGACAACAACCAGGAAAACAGCGcttttcacaaCCTGACACTGACCCTGTCCAGGCTGTCGGTGAACCTGAGTCTGATCTCCAATGATTCTAAGTTGGTTCAGCCAAACATCGCGATCCAGTCGGCTCAGATCTCAGCAGCCGACACTCTGGGAGTCCAGTTCACCGCGCTGTCAGGAACGTTGGGAAGTTTCATTGCCGACCGCATCCAGCTGGACACCAACACGTCGGCCCTCACCGTGGAACCTGGCTTCATCGCCGACGCCGTCTTTTACCTCCAGTTCCCCCCAGgcGGTGCTGCTGGCAGTCTCCGGACTCCATCCAACGTGTCTGTGGGTTTCGTCCTCTACCAAAACGACCACTTCTTCCGCTCGCAGCGCTACAGGCGGCGCCGGGCCACCGTCAGGGTCCTGTCAGCCACCGTCGGCGGTCTGGAGCCGCAAAAGGTCCAGATGGAATTCAGACCACTGCTTCTGGACAGTACGTCTCTGTGGGACTTCTCGTGTGTTTTTTGGGACTACAGTTTGGAGGATTGGAGCGAGGCTGGCTGCTGGAAGGGAAACGCTTCAGACGGAGTCCTCCGATGTTTCTGCAACCACACAACCAACTTCGCTGCTCTCTGGTCCTTCAGAGAGAATTATGAATATGCAGACATGCTGGATGTGATTTCTATAGTTGgactttctctctccatcctggGTTTGGTTTTTACGATAATTCACCACATTACAGACAACTTTAAGAAAAACAGTGGCGAACGGAAGAAGTGCAGGAACTCCCAGCTTGCTTTGTTGAGTATATGTTTCAGCCTGCTGGCCTTCATCATCACCTTCCTCTCTGGCGTCACAAACCGCCGACAGGACACAGGCGAGGACGACGCGTTGCTCGACACCGAGACCAACGGCGTCCTGGACTCTGACGAACACGTGGCGGCAGACAGCGGCCCATGTTCGGTGGTAACGGCGCTGCTTCACTTCTTCCTGTTAGCTACGTTCATGTGGAACAGCATGTACGCCACGCAGCTGGTGCTGCTCATCCGCAAGATGCACCAGAACCTGCCACCATACTGGACGAAGCTCAGCACCACCATAGGATGGGGAGTCCCAGCTGTCGTCATGGCGATCACACTGGGAATCGCCTACAGGGTGGACGAACCTCTAGGATATAGACAGGAGgaattTTGCTGGCTGGCAGCGCTGGATAAATCCAAACACTTTGACTTTGGGAAGCCGatgttttggggttttctgCTTCCTATCGGTTTGATTCTGATCTACAACATCGTTTTGTTGGTTCTGGTCTCTCAGACCACCTGCAGGACCGACCCCGCCCTCAAAAGCAGTAGCCCTCGGTCCGTGTGGAGGAAGTTTCTGATCAGTTTCTCTCTGGCCGTGTTACTCGGTTTGTCCTGGACTCTGGGTTACCTGGTGCTGGTTACCACGGGATACGCCCACCTGGTGCTCAGCATCCTCTTCTGCCTCTGCACCACCACACAGgGGCTCCAGATATTCGTCCTGTTCACCGCCAGAACGCCGAGCTTCAGAGCCGGCGTGTCACAAGTGGTTCAGAGCATCTCGTCTGTCAACATCCAACTCAAAGAGTTTTCATATAATCTGCTGAGAGAATGGACTCACTCTACCGAGTCCTACAGAGACCTGACAGACTAGAGTTTTTTTTGCAGCAATTTCTATctaatttttttacttttgttatgAAA

Function

GO: NA

KEGG:

id description
K08464 ADGRG7, GPR128; adhesion G-protein coupled receptor G7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU320756 lncRNA upstream 88007 20979907 ~ 21077796 (+) False LOC120554011
TU320755 lncRNA upstream 95359 20979907 ~ 21070444 (+) True LOC120554011
TU320761 lncRNA upstream 177392 20980566 ~ 20988411 (+) False G236413
TU320759 lncRNA upstream 177392 20981110 ~ 20988411 (+) False G236413
TU320760 lncRNA upstream 177392 20981110 ~ 20988411 (+) True G236413
TU320802 lncRNA downstream 2158 21193603 ~ 21247124 (+) False G236446
TU320805 lncRNA downstream 5980 21197425 ~ 21203222 (+) False G236448
TU320806 lncRNA downstream 5980 21197425 ~ 21202606 (+) False G236448
TU320808 lncRNA downstream 5980 21197425 ~ 21203222 (+) False G236448
TU320811 lncRNA downstream 5980 21197425 ~ 21203222 (+) True G236448
XM_039792560.1 mRNA upstream 249 21157961 ~ 21165554 (+) True LOC120554012
XM_039793676.1 mRNA upstream 45033 21098583 ~ 21120770 (+) True LOC120554651
XM_039793667.1 mRNA upstream 101886 21049514 ~ 21063917 (+) True LOC120554645
XM_039793669.1 mRNA upstream 101886 21049514 ~ 21063917 (+) False LOC120554645
XM_039793668.1 mRNA upstream 101886 21049514 ~ 21063917 (+) False LOC120554645
XM_039793687.1 mRNA downstream 97918 21289363 ~ 21292223 (+) True LOC120554662
XM_039793688.1 mRNA downstream 176000 21367445 ~ 21371904 (+) True dph3
XM_039793682.1 mRNA downstream 181170 21372615 ~ 21392410 (+) True cdk15
XM_039793683.1 mRNA downstream 181171 21372616 ~ 21392410 (+) False cdk15
XM_039793684.1 mRNA downstream 412047 21603492 ~ 21605036 (+) True LOC120554659
TU320732 other upstream 249026 20912655 ~ 20916777 (+) True G236394
TU320664 other upstream 344079 20815736 ~ 20821724 (+) False fmnl2b
XR_005638570.1 other upstream 655858 20487667 ~ 20509945 (+) False LOC120554724
TU320542 other upstream 768484 20383386 ~ 20397319 (+) False cd99
XR_005638373.1 other upstream 932008 20208329 ~ 20233795 (+) False prkx
TU320869 other downstream 110881 21302326 ~ 21361235 (+) False G236467
TU320853 other downstream 216482 21407927 ~ 21422915 (+) False G236461
TU320855 other downstream 216482 21407927 ~ 21422915 (+) True G236461
TU320854 other downstream 219367 21410812 ~ 21422915 (+) False G236461
TU320856 other downstream 222792 21414237 ~ 21422915 (+) False G236461

Expression Profile